RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ATG4AQ8WYN0 398 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 ST8SIA4Q92187 359 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 ZBTB10Q96DT7 871 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 REEP2Q9BRK0 252 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 HTATIP2Q9BUP3 242 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 PAIP1Q9H074 479 aaKnown RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 SERHL2Q9H4I8 314 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 PLEKHA5Q9HAU0 1116 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 GLOD4Q9HC38 313 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TBC1D22BQ9NU19 505 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 BLOC1S4Q9NUP1 217 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 PCDHB7Q9Y5E2 793 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 COL4A3Q01955 1670 aa5.9□□□□□ -1.47
CPSF6-206ENST00000550987 CCNB3Q8WWL7 1395 aa5.9□□□□□ -1.47
CPSF6-206ENST00000550987 ZFHX2Q9C0A1 2572 aaPredicted RBP5.9□□□□□ -1.47
CPSF6-206ENST00000550987 COL2A1P02458 1487 aaPredicted RBP5.9□□□□□ -1.47
CPSF6-206ENST00000550987 TCF20Q9UGU0 1960 aaKnown RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 PRSS47A8MTI9 375 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 ANP32CO43423 234 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 WDR47O94967 919 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 TBX18O95935 607 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 PLATP00750 562 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 BMP7P18075 431 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 PGM1P36871 562 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 PBX1P40424 430 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 CASP6P55212 293 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 EIF4A1P60842 406 aaKnown RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.89□□□□□ -1.472e-6■■□□□ 14.4
CPSF6-206ENST00000550987 RESTQ13127 1097 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 CLCA4Q14CN2 919 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 ZNF124Q15973 351 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 CYP2A13Q16696 494 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 B3GNTL1Q67FW5 361 aaPredicted RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 ANKRD40Q6AI12 368 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 SP5Q6BEB4 398 aaPredicted RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 CAND1Q86VP6 1230 aaKnown RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 FEZF2Q8TBJ5 459 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 SLC22A17Q8WUG5 538 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 ZUFSPQ96AP4 578 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 RBM17Q96I25 401 aaKnown RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 BOD1Q96IK1 185 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 TOX2Q96NM4 488 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 MECRQ9BV79 373 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 OSBPL5Q9H0X9 879 aaPredicted RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 ALG13Q9NP73 1137 aaKnown RBP5.89□□□□□ -1.47
CPSF6-206ENST00000550987 TMLHEQ9NVH6 421 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 TBX20Q9UMR3 447 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 JAG2Q9Y219 1238 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 DNAJC16Q9Y2G8 782 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 CHST2Q9Y4C5 530 aa5.89□□□□□ -1.47
CPSF6-206ENST00000550987 MYO18BQ8IUG5 2567 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 A1L4Q6 167 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 GPR42O15529 346 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 KLK10O43240 276 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 NDUFA10O95299 355 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 VNN1O95497 513 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 CNPP09543 421 aaKnown RBP5.88□□□□□ -1.47
CPSF6-206ENST00000550987 HNRNPA1P09651 372 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPSF6-206ENST00000550987 THBS4P35443 961 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 CDK7P50613 346 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 DGKQP52824 942 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 CLNS1AP54105 237 aaKnown RBP5.88□□□□□ -1.47
CPSF6-206ENST00000550987 SP2Q02086 613 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 EIF2B5Q13144 721 aaKnown RBP5.88□□□□□ -1.47
CPSF6-206ENST00000550987 FHL3Q13643 280 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 RRP1BQ14684 758 aaKnown RBP5.88□□□□□ -1.47
CPSF6-206ENST00000550987 ACOX1Q15067 660 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 TOMM20Q15388 145 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 HAUS3Q68CZ6 603 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 CCDC144NLQ6NUI1 221 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 MSANTD2Q6P1R3 559 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 BBS12Q6ZW61 710 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 HTR3DQ70Z44 454 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 NGDNQ8NEJ9 315 aaKnown RBP5.88□□□□□ -1.47
CPSF6-206ENST00000550987 XAGE5Q8WWM1 108 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 RFFLQ8WZ73 363 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 GLG1Q92896 1179 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 NACC2Q96BF6 587 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 MCRS1Q96EZ8 462 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 WDR24Q96S15 920 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 PDCL3Q9H2J4 239 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 THEGQ9P2T0 379 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 RIMKLBQ9ULI2 386 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 KANK1Q14678 1352 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 E9PCH4 1651 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 DLEC1Q9Y238 1755 aa5.88□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3DA0A087WVF3 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3IA0A087WXS9 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3EA0A087X179 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3KA0A087X1G2 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 GAGE12BA1L429 117 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 ANKRD18BA2A2Z9 1011 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 GAGE12HA6NDE8 117 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3BA6NDS4 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3FA6NER0 549 aaPredicted RBP5.87□□□□□ -1.47
CPSF6-206ENST00000550987 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 TBC1D3LB9A6J9 549 aa5.87□□□□□ -1.47
CPSF6-206ENST00000550987 PAX4O43316 350 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms