RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 TRIP13Q15645 432 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-217ENST00000550483 DENND2CQ68D51 928 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 NPNTQ6UXI9 565 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 KLHL23Q8NBE8 558 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 GIPC2Q8TF65 315 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 UBLCP1Q8WVY7 318 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-217ENST00000550483 EXOC4Q96A65 974 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 DDX50Q9BQ39 737 aaKnown RBP12.95□□□□□ -0.34
CACNB3-217ENST00000550483 NACA2Q9H009 215 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 PPCSQ9HAB8 311 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 OSER1Q9NX31 292 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 TRHDEQ9UKU6 1024 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 ATP8A1Q9Y2Q0 1164 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 REV3LO60673 3130 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 PIEZO1Q92508 2521 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 MYO16Q9Y6X6 1858 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 A0A0A0MRY4 1105 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 SOBPA7XYQ1 873 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 MFSD11O43934 449 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 SOAT2O75908 522 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 SEC24AO95486 1093 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 ABHD2P08910 425 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 RHOQP17081 205 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 HMGA1P17096 107 aaKnown RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 RBL1P28749 1068 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 CTNNB1P35222 781 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 SLC11A2P49281 568 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 HARS2P49590 506 aaKnown RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 CDR1P51861 262 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 GDF10P55107 478 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 TWF1Q12792 350 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 ITPRIPL1Q6GPH6 555 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 TIGD7Q6NT04 549 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 ARHGEF18Q6ZSZ5 1173 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 TMC7Q7Z402 723 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 TMCO2Q7Z6W1 182 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 PDIK1LQ8N165 341 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 RTL3Q8N8U3 475 aaKnown RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 TSEN2Q8NCE0 465 aaKnown RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 MCUQ8NE86 351 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 FATE1Q969F0 183 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 FAM122AQ96E09 287 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 GDAP1L1Q96MZ0 367 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 SPATA13Q96N96 652 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 SH3GL2Q99962 352 aa12.94□□□□□ -0.34
CACNB3-217ENST00000550483 EIF2B3Q9NR50 452 aaKnown RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 CXXC1Q9P0U4 656 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 MAGED2Q9UNF1 606 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-217ENST00000550483 IGLV3-10A0A075B6K4 115 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 GOLGA6CA6NDK9 693 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 E9PAM4 449 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 FAM72CH0Y354 149 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 AP3B1O00203 1094 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 TP73O15350 636 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 MSI1O43347 362 aaKnown RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 SPAG6O75602 509 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 CXCL14O95715 111 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 GLUD1P00367 558 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 LRG1P02750 347 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 IVLP07476 585 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 GOLGA6DP0CG33 693 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 TPSB2P20231 275 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 DNAJB2P25686 324 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 BASP1P80723 227 aaKnown RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 IFFO1Q0D2I5 559 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 SLC10A2Q12908 348 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 TPSAB1Q15661 275 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 HIF1AQ16665 826 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 FAM72AQ5TYM5 149 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 FAM72DQ6L9T8 149 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 RWDD4Q6NW29 188 aaKnown RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 FAM72BQ86X60 149 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 NAT8LQ8N9F0 302 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 LEMD2Q8NC56 503 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 GPR152Q8TDT2 470 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 CPT1BQ92523 772 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 PRCCQ92733 491 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 LRRC39Q96DD0 335 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ZIM3Q96PE6 472 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 TSGA13Q96PP4 275 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 KLHL5Q96PQ7 755 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 GCNAQ96QF7 691 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 CCDC77Q9BR77 488 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 TMEM109Q9BVC6 243 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ROPN1BQ9BZX4 212 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ZYG11BQ9C0D3 744 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 STMN4Q9H169 189 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ADAM7Q9H2U9 754 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ROPN1Q9HAT0 212 aaPredicted RBP12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ANLNQ9NQW6 1124 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ENTPD7Q9NQZ7 604 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 TLR9Q9NR96 1032 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 HAUS2Q9NVX0 235 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 GOLGA6AQ9NYA3 693 aa12.93□□□□□ -0.34
CACNB3-217ENST00000550483 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms