RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 MPP6Q9NZW5 540 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 STIM2Q9P246 746 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 PPARGC1AQ9UBK2 798 aaKnown RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 CAPN6Q9Y6Q1 641 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 F5P12259 2224 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 USP27XA6NNY8 438 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 KRT86O43790 486 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 TULP3O75386 442 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 PALMO75781 387 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 CYBBP04839 570 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 CD48P09326 243 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 HOXC13P31276 330 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 GJC1P36383 396 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 SLC1A1P43005 524 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 SSR1P43307 286 aaKnown RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 NAP1L1P55209 391 aaKnown RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 PON2Q15165 354 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 DPYSL2Q16555 572 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 FSCBQ5H9T9 825 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 ACBD5Q5T8D3 534 aaPredicted RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 KIAA0907Q7Z7F0 614 aaPredicted RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 NLRP14Q86W24 1093 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 SIX5Q8N196 739 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 OR52K2Q8NGK3 314 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 TSC1Q92574 1164 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 CALR3Q96L12 384 aaKnown RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 TSGA10Q9BZW7 698 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 EPHX3Q9H6B9 360 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 NDFIP2Q9NV92 336 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 KLHL11Q9NVR0 708 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 CWC15Q9P013 229 aaKnown RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 FBXL21Q9UKT6 434 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 MTF2Q9Y483 593 aaPredicted RBP13.45□□□□□ -0.26
RAB5C-206ENST00000550406 TRIOO75962 3097 aa13.45□□□□□ -0.26
RAB5C-206ENST00000550406 NYNRINQ9P2P1 1898 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 A0A0A0MRY4 1105 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 C3orf70A6NLC5 250 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 CREB3O43889 395 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 LUC7L3O95232 432 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 PDGFBP01127 241 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 TNNT1P13805 278 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 GOT1P17174 413 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 HLA-FP30511 346 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 EIF2DP41214 584 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 MARCKSL1P49006 195 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 PRKCQQ04759 706 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 MMRN1Q13201 1228 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 FZD5Q13467 585 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 HADHQ16836 314 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 TMEM196Q5HYL7 178 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 RABGAP1LQ5R372 815 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 LRRC38Q5VT99 294 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 FSTL4Q6MZW2 842 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 CXorf57Q6NSI4 855 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 TRIM67Q6ZTA4 783 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 CHST9Q7L1S5 443 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 POLNQ7Z5Q5 900 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 ANKS1BQ7Z6G8 1248 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 DAAM2Q86T65 1068 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 NT5DC3Q86UY8 548 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 CARNMT1Q8N4J0 409 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 FIBINQ8TAL6 211 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 KIAA1524Q8TCG1 905 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 FAM3CQ92520 227 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 RAPGEF5Q92565 580 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 KRT35Q92764 455 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 TBC1D31Q96DN5 1066 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 XPO6Q96QU8 1125 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 SLC2A11Q9BYW1 496 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 PCDH18Q9HCL0 1135 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 DNAJC17Q9NVM6 304 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 TRMT1Q9NXH9 659 aaKnown RBP13.44□□□□□ -0.26
RAB5C-206ENST00000550406 HCN2Q9UL51 889 aa13.44□□□□□ -0.26
RAB5C-206ENST00000550406 A0A1B0GVM2 712 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 TCAF2A6NFQ2 919 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 TNFRSF10AO00220 468 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 SPOPO43791 374 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 ALADP13716 330 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 KDELR1P24390 212 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 CD70P32970 193 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 HCAR3P49019 387 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 DGKGP49619 791 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 CDH4P55283 916 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 KDSRQ06136 332 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 LMAN2Q12907 356 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 DPYSQ14117 519 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 DPYSL3Q14195 570 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 GEN1Q17RS7 908 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 PPP6R3Q5H9R7 873 aaPredicted RBP13.43□□□□□ -0.26
RAB5C-206ENST00000550406 TTC39BQ5VTQ0 682 aaPredicted RBP13.43□□□□□ -0.26
RAB5C-206ENST00000550406 TMEM215Q68D42 235 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 RHOT1Q8IXI2 618 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms