RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 TRIM32Q13049 653 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 ACAP1Q15027 740 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 LPCAT4Q643R3 524 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 NXNQ6DKJ4 435 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 CXCL17Q6UXB2 119 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 RGS9BPQ6ZS82 235 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 CRYBG2Q8N1P7 616 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 NKD2Q969F2 451 aaPredicted RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 TUBGCP5Q96RT8 1024 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 SAR1AQ9NR31 198 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 ETNK2Q9NVF9 386 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 TSPAN16Q9UKR8 245 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 CDY2AQ9Y6F7 541 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 THSD7BQ9C0I4 1608 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 PGK1P00558 417 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 SETSIPP0DME0 302 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 CCDC130P13994 396 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 AVPR1AP37288 418 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 CCR10P46092 362 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 RPL34P49207 117 aaKnown RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 PRKD1Q15139 912 aaPredicted RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 RBBP5Q15291 538 aaKnown RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 SOWAHAQ2M3V2 549 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 CEP128Q6ZU80 1094 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 SCUBE1Q8IWY4 988 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 ARRDC4Q8NCT1 418 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 MZB1Q8WU39 189 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 MTBPQ96DY7 904 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 APOPT1Q96IL0 206 aa11.4□□□□□ -0.58
LINC00661-204ENST00000549354 MRPL45Q9BRJ2 306 aaKnown RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 GPBP1L1Q9HC44 474 aaPredicted RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 DRG1Q9Y295 367 aaKnown RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 MTO1Q9Y2Z2 717 aaKnown RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.4□□□□□ -0.58
LINC00661-204ENST00000549354 WDR27A2RRH5 827 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 CHRNA1P02708 482 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 IGFBP6P24592 240 aaPredicted RBP11.4□□□□□ -0.59
LINC00661-204ENST00000549354 PITX1P78337 314 aaPredicted RBP11.4□□□□□ -0.59
LINC00661-204ENST00000549354 USP4Q13107 963 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 DLG2Q15700 870 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 HSF5Q4G112 596 aaPredicted RBP11.4□□□□□ -0.59
LINC00661-204ENST00000549354 WNT8BQ93098 351 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 E2F7Q96AV8 911 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 SKA1Q96BD8 255 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 PPP1R10Q96QC0 940 aaKnown RBP11.4□□□□□ -0.59
LINC00661-204ENST00000549354 PANX3Q96QZ0 392 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 ZNF184Q99676 751 aaPredicted RBP11.4□□□□□ -0.59
LINC00661-204ENST00000549354 FOXP3Q9BZS1 431 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 DPEP3Q9H4B8 488 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 CAB39LQ9H9S4 337 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 SLC7A8Q9UHI5 535 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 NUDT5Q9UKK9 219 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 NUP205Q92621 2012 aa11.4□□□□□ -0.59
LINC00661-204ENST00000549354 E9PBE3 544 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 KLHL41O60662 606 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 CIB2O75838 187 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 CSH1P0DML2 217 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 CSH2P0DML3 217 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 ERVK-10P10266 1014 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 NELFEP18615 380 aaKnown RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 CALRP27797 417 aaKnown RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 SP3Q02447 781 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 TAZQ16635 292 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 ZNF618Q5T7W0 954 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 OR52E8Q6IFG1 317 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 FAM183BPQ6ZVS7 135 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 MRPL10Q7Z7H8 261 aaKnown RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 RNF217Q8TC41 542 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 KBTBD7Q8WVZ9 684 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 SLC4A5Q9BY07 1137 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 ATXN3LQ9H3M9 355 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 XPNPEP3Q9NQH7 507 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 RNF186Q9NXI6 227 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 DDX56Q9NY93 547 aaKnown RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 PLA2G4CQ9UP65 541 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 FNDC3AQ9Y2H6 1198 aaKnown RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 C5orf42Q9H799 3197 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 MYOCOSA0A1B0GUC4 107 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 C3orf70A6NLC5 250 aaPredicted RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 TM9SF1O15321 606 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 SNUPNO95149 360 aaKnown RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 METTL18O95568 372 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 SLC25A11Q02978 314 aaKnown RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 BTKQ06187 659 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 GOLGA7BQ2TAP0 167 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 FAM26DQ5JW98 314 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 FBXO47Q5MNV8 452 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 PMF1Q6P1K2 205 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 RAPH1Q70E73 1250 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 ULK2Q8IYT8 1036 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 ZNF560Q96MR9 790 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 OXCT2Q9BYC2 517 aaPredicted RBP11.39□□□□□ -0.59
LINC00661-204ENST00000549354 LNPEPQ9UIQ6 1025 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 EFR3BQ9Y2G0 817 aa11.39□□□□□ -0.59
LINC00661-204ENST00000549354 SPECC1L-ADORA2AF8WAN1 911 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 M0QZ92 97 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 CLDN5O00501 218 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 TRAFD1O14545 582 aaPredicted RBP11.38□□□□□ -0.59
LINC00661-204ENST00000549354 PTGESO14684 152 aa11.38□□□□□ -0.59
LINC00661-204ENST00000549354 SPTLC1O15269 473 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms