RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 Q6ZNB5 142 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 SCD5Q86SK9 330 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 DENND1CQ8IV53 801 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 CLEC18CQ8NCF0 446 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 KIAA0895Q8NCT3 520 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 TAS1R2Q8TE23 839 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 RNF139Q8WU17 664 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 TWNKQ96RR1 684 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 SEMA3CQ99985 751 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 UBXN6Q9BZV1 441 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 TMEM8AQ9HCN3 771 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 OLA1Q9NTK5 396 aaKnown RBP8.85□□□□□ -0.99
TROAP-208ENST00000548817 HESX1Q9UBX0 185 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 RCOR1Q9UKL0 485 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 TRAF3IP3Q9Y228 551 aa8.85□□□□□ -0.99
TROAP-208ENST00000548817 FBN2P35556 2912 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 CENPEQ02224 2701 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 A0A1B0GVL5 298 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 CBX4O00257 560 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 KCNK3O14649 394 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 TSPAN3O60637 253 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 MT-CO3P00414 261 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 PFKFB1P16118 471 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 ACP1P24666 158 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 EPHA8P29322 1005 aaPredicted RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 GTF2H1P32780 548 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 SYKP43405 635 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 BCAT1P54687 386 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 ZNF445P59923 1031 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 YWHAGP61981 247 aaKnown RBP eCLIP8.84□□□□□ -0.99
TROAP-208ENST00000548817 YWHAEP62258 255 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 GABREP78334 506 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 IL9RQ01113 521 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 DNM1Q05193 864 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 ZBTB16Q05516 673 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 ENPEPQ07075 957 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 ZNF234Q14588 700 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 FNDC3BQ53EP0 1204 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 MPPE1Q53F39 396 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 SFMBT2Q5VUG0 894 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 FYB2Q5VWT5 728 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 KIAA1614Q5VZ46 1190 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 FAM124AQ86V42 546 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 GATAD2AQ86YP4 633 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 CPXM2Q8N436 756 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 OXR1Q8N573 874 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 EID2Q8N6I1 236 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 EXD3Q8N9H8 876 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 SNX21Q969T3 373 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 PLD4Q96BZ4 506 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 BIRC7Q96CA5 298 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 FAXDC2Q96IV6 333 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 SPATA32Q96LK8 384 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 IPO9Q96P70 1041 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 C6orf106Q9H6K1 298 aaPredicted RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 POLR1BQ9H9Y6 1135 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 LRRC4Q9HBW1 653 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 APOBEC3GQ9HC16 384 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 ASCL3Q9NQ33 180 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 AGO1Q9UL18 857 aaKnown RBP8.84□□□□□ -0.99
TROAP-208ENST00000548817 USP3Q9Y6I4 520 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 SLCO1B1Q9Y6L6 691 aa8.84□□□□□ -0.99
TROAP-208ENST00000548817 NBPF19A0A087WUL8 3843 aa8.83□□□□□ -1
TROAP-208ENST00000548817 ARID1BQ8NFD5 2236 aaPredicted RBP8.83□□□□□ -1
TROAP-208ENST00000548817 CETN3O15182 167 aa8.83□□□□□ -1
TROAP-208ENST00000548817 KRT38O76015 456 aa8.83□□□□□ -1
TROAP-208ENST00000548817 SEMA4FO95754 770 aa8.83□□□□□ -1
TROAP-208ENST00000548817 ZBED1O96006 694 aa8.83□□□□□ -1
TROAP-208ENST00000548817 KLKB1P03952 638 aa8.83□□□□□ -1
TROAP-208ENST00000548817 ITGB2P05107 769 aa8.83□□□□□ -1
TROAP-208ENST00000548817 ATP5BP06576 529 aaKnown RBP8.83□□□□□ -1
TROAP-208ENST00000548817 EPB41P11171 864 aaKnown RBP8.83□□□□□ -1
TROAP-208ENST00000548817 TKTL1P51854 596 aa8.83□□□□□ -1
TROAP-208ENST00000548817 COPAP53621 1224 aa8.83□□□□□ -1
TROAP-208ENST00000548817 SKOR1P84550 965 aa8.83□□□□□ -1
TROAP-208ENST00000548817 PPP3CAQ08209 521 aa8.83□□□□□ -1
TROAP-208ENST00000548817 NFIL3Q16649 462 aa8.83□□□□□ -1
TROAP-208ENST00000548817 GEN1Q17RS7 908 aa8.83□□□□□ -1
TROAP-208ENST00000548817 SGO2Q562F6 1265 aa8.83□□□□□ -1
TROAP-208ENST00000548817 C1orf220Q5T0J3 134 aa8.83□□□□□ -1
TROAP-208ENST00000548817 CCDC81Q6ZN84 652 aa8.83□□□□□ -1
TROAP-208ENST00000548817 CACUL1Q86Y37 369 aa8.83□□□□□ -1
TROAP-208ENST00000548817 CCDC117Q8IWD4 279 aaPredicted RBP8.83□□□□□ -1
TROAP-208ENST00000548817 SIX6OS1Q8N1H7 587 aa8.83□□□□□ -1
TROAP-208ENST00000548817 GUF1Q8N442 669 aaKnown RBP8.83□□□□□ -1
TROAP-208ENST00000548817 ANKRD52Q8NB46 1076 aa8.83□□□□□ -1
TROAP-208ENST00000548817 FBXL13Q8NEE6 735 aa8.83□□□□□ -1
TROAP-208ENST00000548817 OR2T3Q8NH03 318 aa8.83□□□□□ -1
TROAP-208ENST00000548817 GANCQ8TET4 914 aa8.83□□□□□ -1
TROAP-208ENST00000548817 WFIKKN2Q8TEU8 576 aa8.83□□□□□ -1
TROAP-208ENST00000548817 GRAMD1AQ96CP6 724 aa8.83□□□□□ -1
TROAP-208ENST00000548817 TMA16Q96EY4 203 aaKnown RBP8.83□□□□□ -1
TROAP-208ENST00000548817 PIWIL1Q96J94 861 aaKnown RBP8.83□□□□□ -1
TROAP-208ENST00000548817 VCPIP1Q96JH7 1222 aa8.83□□□□□ -1
TROAP-208ENST00000548817 PSMG3-AS1Q96PY0 264 aa8.83□□□□□ -1
TROAP-208ENST00000548817 BTBD1Q9H0C5 482 aa8.83□□□□□ -1
TROAP-208ENST00000548817 LHX5Q9H2C1 402 aa8.83□□□□□ -1
TROAP-208ENST00000548817 ERVMER34-1Q9H9K5 563 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms