RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 IP6K2Q9UHH9 426 aa12.14□□□□□ -0.47
TUBA1C-203ENST00000548470 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
TUBA1C-203ENST00000548470 SLC12A6Q9UHW9 1150 aa12.14□□□□□ -0.47
TUBA1C-203ENST00000548470 FBXO10Q9UK96 956 aa12.14□□□□□ -0.47
TUBA1C-203ENST00000548470 PCDHGA2Q9Y5H1 932 aa12.14□□□□□ -0.47
TUBA1C-203ENST00000548470 ALG6Q9Y672 507 aa12.14□□□□□ -0.47
TUBA1C-203ENST00000548470 HELZP42694 1942 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 TIMM44O43615 452 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 SPOPO43791 374 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 KAT7O95251 611 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 HMBSP08397 361 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 TYRP14679 529 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 SDC4P31431 198 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 CNR2P34972 360 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 NOS2P35228 1153 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 MATKP42679 507 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 TBX4P57082 545 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 GAS6Q14393 721 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 IFI16Q16666 785 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 ACBD5Q5T8D3 534 aaPredicted RBP12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 ARCQ7LC44 396 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 PEX26Q7Z412 305 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 TRMT11Q7Z4G4 463 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 FAM172AQ8WUF8 416 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 WBP2Q969T9 261 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 NPY6RQ99463 290 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 CNPY3Q9BT09 278 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 FAM204AQ9H8W3 233 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 TMPRSS4Q9NRS4 437 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 RBM12Q9NTZ6 932 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 GPATCH2LQ9NWQ4 482 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 PCSK1NQ9UHG2 260 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 SLC27A6Q9Y2P4 619 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 STARD13Q9Y3M8 1113 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 COL4A2P08572 1712 aa12.13□□□□□ -0.47
TUBA1C-203ENST00000548470 TBC1D3BA6NDS4 549 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 K7EQS6 105 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 M0QYT0 321 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 NPC1O15118 1278 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 RNF40O75150 1001 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 TULP3O75386 442 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 LRCH4O75427 683 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 F9P00740 461 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 PENKP01210 267 aaPredicted RBP12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 IL1R2P27930 398 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 MIPP30301 263 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 MAN1A1P33908 653 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 PTPN9P43378 593 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 SLC6A11P48066 632 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 HDAC4P56524 1084 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 NME3Q13232 169 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 ATP13A4Q4VNC1 1196 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 MEI1Q5TIA1 1274 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 GRAMD4Q6IC98 578 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 CYP4V2Q6ZWL3 525 aaPredicted RBP12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 NIPA2Q8N8Q9 360 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 FNIP1Q8TF40 1166 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 ALG3Q92685 438 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 TMA16Q96EY4 203 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 SLC39A13Q96H72 371 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 MAGEB5Q9BZ81 275 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 ZWILCHQ9H900 591 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 PIGVQ9NUD9 493 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 AMFRQ9UKV5 643 aa12.12□□□□□ -0.47
TUBA1C-203ENST00000548470 NEDD8-MDP1E9PL57 170 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 DDX3YO15523 660 aaKnown RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 ACSL4O60488 711 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SRGAP2O75044 1071 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 IGLV3-25P01717 112 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 APOEP02649 317 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 CASQ1P31415 396 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 CCR1P32246 355 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 CXCR5P32302 372 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 DGKGP49619 791 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SLC25A11Q02978 314 aaKnown RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 EIF4EBP2Q13542 120 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 PIGHQ14442 188 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SMTNL2Q2TAL5 461 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 EOGTQ5NDL2 527 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 DCAF12L1Q5VU92 463 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 AADACL2Q6P093 401 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 LONP2Q86WA8 852 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 FAM131BQ86XD5 332 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 PHTF2Q8N3S3 785 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 CCDC185Q8N715 623 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms