RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 DENND1BQ6P3S1 775 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 LGI2Q8N0V4 545 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 LMO3Q8TAP4 145 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 KREMEN1Q96MU8 473 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 TIGD1Q96MW7 591 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 INTS2Q9H0H0 1204 aaKnown RBP21.11■□□□□ 0.97
SSH1-207ENST00000547862 PABPC3Q9H361 631 aaKnown RBP21.11■□□□□ 0.97
SSH1-207ENST00000547862 SERGEFQ9UGK8 458 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 INTS6Q9UL03 887 aaKnown RBP21.11■□□□□ 0.97
SSH1-207ENST00000547862 NCKAP1Q9Y2A7 1128 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 ANKRD6Q9Y2G4 727 aa21.11■□□□□ 0.97
SSH1-207ENST00000547862 KNL1Q8NG31 2342 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 ZFYVE26Q68DK2 2539 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 A0A1W2PP55 124 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 MID1O15344 667 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 APOEP02649 317 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 FYNP06241 537 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 ATXN1LP0C7T5 689 aaKnown RBP21.1■□□□□ 0.97
SSH1-207ENST00000547862 HOXB3P14651 431 aaPredicted RBP21.1■□□□□ 0.97
SSH1-207ENST00000547862 GRIA4P48058 902 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 PSMD8P48556 350 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 ZBTB16Q05516 673 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 KCNH2Q12809 1159 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 FSCBQ5H9T9 825 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 MS4A13Q5J8X5 152 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 PITRM1Q5JRX3 1037 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 MARCH9Q86YJ5 346 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 ZNF557Q8N988 423 aaPredicted RBP21.1■□□□□ 0.97
SSH1-207ENST00000547862 FIBINQ8TAL6 211 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 MYO19Q96H55 970 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 SLC6A18Q96N87 628 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 SGK2Q9HBY8 427 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 FBXL12Q9NXK8 326 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 TLR6Q9Y2C9 796 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 ADAMTS20P59510 1910 aa21.1■□□□□ 0.97
SSH1-207ENST00000547862 FREM2Q5SZK8 3169 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 BICDL2A1A5D9 508 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 TTC34A8MYJ7 566 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 TAF4O00268 1085 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 THAP12O43422 761 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 RNASEH1O60930 286 aaKnown RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 LETM1O95202 739 aaPredicted RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 LUC7L3O95232 432 aaKnown RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 AFPP02771 609 aaKnown RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 ASLP04424 464 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 BMP6P22004 513 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 CD27P26842 260 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 PPP1R2P41236 205 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 CCT8P50990 548 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 GCNT1Q02742 428 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 BECN1Q14457 450 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 DCAF6Q58WW2 860 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 KCNT1Q5JUK3 1230 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 SYPL2Q5VXT5 272 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 RNF219Q5W0B1 726 aaPredicted RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 KIAA0895LQ68EN5 471 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 GLRX5Q86SX6 157 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 CIR1Q86X95 450 aaPredicted RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 PROSER1Q86XN7 944 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 MMAAQ8IVH4 418 aaKnown RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 EHBP1Q8NDI1 1231 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 BAHD1Q8TBE0 780 aaPredicted RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 MDM1Q8TC05 714 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 LMLNQ96KR4 655 aa21.09■□□□□ 0.97
SSH1-207ENST00000547862 RSPH9Q9H1X1 276 aaPredicted RBP21.09■□□□□ 0.97
SSH1-207ENST00000547862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.09■□□□□ 0.97
SSH1-207ENST00000547862 CABIN1Q9Y6J0 2220 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 SYNJ2BP-COX16A0A087WUM0 186 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 FAM221BA6H8Z2 402 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 PPP1R3GB7ZBB8 358 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 E5RJQ4 531 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 H0Y8X5 98 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 PMM2O15305 246 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 P4HA2O15460 535 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 RNASEH2AO75792 299 aaKnown RBP21.08■□□□□ 0.97
SSH1-207ENST00000547862 MOCS3O95396 460 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 C21orf59P57076 290 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 NUCB2P80303 420 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 PAK1Q13153 545 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 CST6Q15828 149 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 HNRNPA1L2Q32P51 320 aaKnown RBP21.08■□□□□ 0.97
SSH1-207ENST00000547862 ZC3H12AQ5D1E8 599 aaKnown RBP21.08■□□□□ 0.97
SSH1-207ENST00000547862 NCEH1Q6PIU2 408 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 C19orf48Q6RUI8 117 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 CREBRFQ8IUR6 639 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 TTC17Q96AE7 1141 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 MRGPRX3Q96LB0 322 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 UBE2TQ9NPD8 197 aaPredicted RBP21.08■□□□□ 0.97
SSH1-207ENST00000547862 ACP6Q9NPH0 428 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 COX16Q9P0S2 106 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 TJP2Q9UDY2 1190 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 ERVW-1Q9UQF0 538 aa21.08■□□□□ 0.97
SSH1-207ENST00000547862 CACNA1GO43497 2377 aa21.08■□□□□ 0.96
SSH1-207ENST00000547862 DSPP15924 2871 aaKnown RBP21.07■□□□□ 0.96
SSH1-207ENST00000547862 SART1O43290 800 aaKnown RBP21.07■□□□□ 0.96
SSH1-207ENST00000547862 IGHV4-34P06331 123 aa21.07■□□□□ 0.96
SSH1-207ENST00000547862 GNA15P30679 374 aa21.07■□□□□ 0.96
SSH1-207ENST00000547862 GPD2P43304 727 aa21.07■□□□□ 0.96
SSH1-207ENST00000547862 ACADSBP45954 432 aa21.07■□□□□ 0.96
SSH1-207ENST00000547862 STK19P49842 368 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms