RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MMP8P22894 467 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 DDX6P26196 483 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 GBP2P32456 591 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 MAPK8P45983 427 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PPP3CCP48454 512 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 GSCP56915 257 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 GSDMDP57764 484 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 SNX16P57768 344 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 CDK17Q00537 523 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 GPR158Q5T848 1215 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 FAM102AQ5T9C2 384 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PM20D1Q6GTS8 502 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 CDPF1Q6NVV7 123 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PPP1R2P3Q6NXS1 205 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 NXPE4Q6UWF7 544 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 SLC26A9Q7LBE3 791 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 OTOP3Q7RTS5 596 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 TMEM110Q86TL2 294 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PHF13Q86YI8 300 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 SCML4Q8N228 414 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 ARHGAP18Q8N392 663 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 WDTC1Q8N5D0 677 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 SLC30A5Q8TAD4 765 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 ATXN2LQ8WWM7 1075 aaKnown RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 CPA5Q8WXQ8 436 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 IRGQQ8WZA9 623 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 ANP32BQ92688 251 aaKnown RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 GOLGA1Q92805 767 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 FAM149B1Q96BN6 582 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PANX2Q96RD6 677 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 MYADMQ96S97 322 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 TRIM62Q9BVG3 475 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 YIPF2Q9BWQ6 316 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PHF7Q9BWX1 381 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 DEF6Q9H4E7 631 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 NMUR1Q9HB89 426 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 TAS2R14Q9NYV8 317 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 CLIC5Q9NZA1 410 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 GDE1Q9NZC3 331 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 ZMYM5Q9UJ78 669 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 CDH7Q9ULB5 785 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 STRIP2Q9ULQ0 834 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 NR2E1Q9Y466 385 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 ACTL7BQ9Y614 415 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 A0A087X0T9 212 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 TRAV19A0A0A6YYK7 116 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 FAM95CA0A1B0GW59 222 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 C2orf78A6NCI8 922 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 YJEFN3A6XGL0 299 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 KIAA1324LA8MWY0 1029 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 TMCO5BA8MYB1 307 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 C2CD4DB7Z1M9 353 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 E7ENQ6 273 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 GOLGA8SH3BPF8 625 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 COCHO43405 550 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 AKR1B10O60218 316 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 HSF2BPO75031 334 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 DAB1O75553 588 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 TGFB1P01137 390 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 LTFP02788 710 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 CALB1P05937 261 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 FAM228BP0C875 321 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 PFKLP17858 780 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 FCARP24071 287 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 GSTT1P30711 240 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 AVPR1AP37288 418 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 GABRB2P47870 512 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 PGFP49763 221 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 YWHAGP61981 247 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 MRPS5P82675 430 aaKnown RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ZP2Q05996 745 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 GFPT1Q06210 699 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 PTP4A2Q12974 167 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 SLC18A3Q16572 532 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 C2CD6Q53TS8 623 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 HECTD3Q5T447 861 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 SNX30Q5VWJ9 437 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 TXNDC8Q6A555 127 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 OR6B2Q6IFH4 312 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 DNAJC24Q6P3W2 148 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 PAOXQ6QHF9 649 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 RSRC2Q7L4I2 434 aaKnown RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 SCD5Q86SK9 330 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 TADA2BQ86TJ2 420 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 MON1AQ86VX9 555 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ERICH1Q86X53 443 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 XYLT1Q86Y38 959 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ZDHHC17Q8IUH5 632 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ADHFE1Q8IWW8 467 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 MAB21L3Q8N8X9 362 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 C3orf20Q8ND61 904 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ZSCAN18Q8TBC5 510 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 FBLIM1Q8WUP2 373 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 NDRG1Q92597 394 aaKnown RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ZNF653Q96CK0 615 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ACSF2Q96CM8 615 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 C18orf8Q96DM3 657 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms