RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 K7EQS6 105 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 SYNCRIPO60506 623 aaKnown RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 KLF8O95600 359 aaPredicted RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 ASLP04424 464 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 CYP1A2P05177 515 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 TFE3P19532 575 aaPredicted RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 MAGEA1P43355 309 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 SULT2A1Q06520 285 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 GAB4Q2WGN9 574 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 ZFYVE27Q5T4F4 411 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 CHST9Q7L1S5 443 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 ZNF564Q8TBZ8 553 aaPredicted RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 USP33Q8TEY7 942 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 EIF3CQ99613 913 aaKnown RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 BAG1Q99933 345 aaPredicted RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 SPTLC3Q9NUV7 552 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 ELOVL2Q9NXB9 296 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 DLGAP2Q9P1A6 1054 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 XPO7Q9UIA9 1087 aaKnown RBP18.04■□□□□ 0.48
CD9-211ENST00000546073 STARD13Q9Y3M8 1113 aa18.04■□□□□ 0.48
CD9-211ENST00000546073 TCRBV5S1A1TA0A578 114 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 E9PAM4 449 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 CISD3P0C7P0 127 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 COL9A1P20849 921 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 NTSR1P30989 418 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 ETFBP38117 255 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 NOP2P46087 812 aaKnown RBP18.03■□□□□ 0.48
CD9-211ENST00000546073 DGKEP52429 567 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 ZNF135P52742 658 aaPredicted RBP18.03■□□□□ 0.48
CD9-211ENST00000546073 ATXN1P54253 815 aaKnown RBP18.03■□□□□ 0.48
CD9-211ENST00000546073 HDAC4P56524 1084 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 KRT83P78385 493 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 SYT13Q7L8C5 426 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 CCDC33Q8N5R6 958 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 CAMKK1Q8N5S9 505 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 TSTD1Q8NFU3 115 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 ATRIPQ8WXE1 791 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 ATOH1Q92858 354 aaPredicted RBP18.03■□□□□ 0.48
CD9-211ENST00000546073 TBC1D31Q96DN5 1066 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 PRMT1Q99873 361 aaKnown RBP18.03■□□□□ 0.48
CD9-211ENST00000546073 MUC3BQ9H195 1237 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 CATSPERBQ9H7T0 1116 aa18.03■□□□□ 0.48
CD9-211ENST00000546073 SHISA7A6NL88 538 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 GFRA2O00451 464 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 RHOCP08134 193 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 OR1E1P30953 314 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 HTR7P34969 479 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 PCK1P35558 622 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 NAP1L1P55209 391 aaKnown RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 FZD5Q13467 585 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 FNDC3BQ53EP0 1204 aaKnown RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 BOLA3Q53S33 107 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 ERMARDQ5T6L9 678 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 SH3PXD2AQ5TCZ1 1133 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 MBLAC2Q68D91 279 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 NAIF1Q69YI7 327 aaPredicted RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 TRNP1Q6NT89 227 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 Q6ZS52 159 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 BNIPLQ7Z465 357 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 SETD3Q86TU7 594 aaPredicted RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 DNAAF5Q86Y56 855 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 PSTKQ8IV42 348 aaKnown RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 ZNF687Q8N1G0 1237 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 PGBD3Q8N328 593 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 ALLCQ8N6M5 410 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 TXNDC5Q8NBS9 432 aaKnown RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 CALR3Q96L12 384 aaKnown RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 GRPEL1Q9HAV7 217 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 BCCIPQ9P287 314 aaKnown RBP eCLIP18.02■□□□□ 0.48
CD9-211ENST00000546073 PPARGC1AQ9UBK2 798 aaKnown RBP18.02■□□□□ 0.48
CD9-211ENST00000546073 PCSK1NQ9UHG2 260 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 SLC25A13Q9UJS0 675 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 MMP17Q9ULZ9 603 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 HPCAL4Q9UM19 191 aa18.02■□□□□ 0.48
CD9-211ENST00000546073 CREB3O43889 395 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 APBB3O95704 486 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 L1CAMP32004 1257 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 SCAPQ12770 1279 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 BYSLQ13895 437 aaKnown RBP18.01■□□□□ 0.47
CD9-211ENST00000546073 ASTE1Q2TB18 679 aaPredicted RBP18.01■□□□□ 0.47
CD9-211ENST00000546073 ZNF528Q3MIS6 628 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 OTUD1Q5VV17 481 aaPredicted RBP18.01■□□□□ 0.47
CD9-211ENST00000546073 SERPINA13PQ6UXR4 307 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 ZNF354CQ86Y25 554 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 PRICKLE1Q96MT3 831 aaPredicted RBP18.01■□□□□ 0.47
CD9-211ENST00000546073 ZWILCHQ9H900 591 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 CALCOCO1Q9P1Z2 691 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 SUN2Q9UH99 717 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 VPS28Q9UK41 221 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 USP18Q9UMW8 372 aa18.01■□□□□ 0.47
CD9-211ENST00000546073 EPN1Q9Y6I3 576 aaPredicted RBP18.01■□□□□ 0.47
CD9-211ENST00000546073 DRGXA6NNA5 263 aa18■□□□□ 0.47
CD9-211ENST00000546073 TRIM24O15164 1050 aa18■□□□□ 0.47
CD9-211ENST00000546073 DLDP09622 509 aaKnown RBP18■□□□□ 0.47
CD9-211ENST00000546073 HOXB2P14652 356 aa18■□□□□ 0.47
CD9-211ENST00000546073 HNRNPLP14866 589 aaKnown RBP eCLIP18■□□□□ 0.47
CD9-211ENST00000546073 EPHB2P29323 1055 aa18■□□□□ 0.47
CD9-211ENST00000546073 HLA-FP30511 346 aa18■□□□□ 0.47
CD9-211ENST00000546073 ARL4AP40617 200 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms