RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 C16orf89Q6UX73 402 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 ARMC2Q8NEN0 867 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 VPS37AQ8NEZ2 397 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 OR2W6PQ8NHA6 318 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 CASKIN2Q8WXE0 1202 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 JADE3Q92613 823 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 SCLYQ96I15 445 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 EIF2AQ9BY44 585 aaKnown RBP9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 ATP13A3Q9H7F0 1226 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 OR12D3Q9UGF7 316 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNHIT2Q9UHR6 403 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 PTCH2Q9Y6C5 1203 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 CDY1Q9Y6F8 540 aa9.25□□□□□ -0.93
MTHFD1-202ENST00000545908 SIGLEC16A6NMB1 481 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 AGRPO00253 132 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 DAB1O75553 588 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF7P17097 686 aaPredicted RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 MGAT1P26572 445 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 RFX3P48380 749 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CLCNKBP51801 687 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 BLVRAP53004 296 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CDH17Q12864 832 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 INPP5AQ14642 412 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 TCEA2Q15560 299 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 INSCQ1MX18 579 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 GRAMD4Q6IC98 578 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 FUT10Q6P4F1 479 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 FAM35AQ86V20 835 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 SPATA20Q8TB22 786 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF333Q96JL9 665 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 MANSC1Q9H8J5 431 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 TMEM161AQ9NX61 479 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ZNF112Q9UJU3 913 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 AURKCQ9UQB9 309 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 EOMESO95936 686 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CCNE2O96020 404 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 DNTTP04053 509 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 TNNI3P19429 210 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CYP2C18P33260 490 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 GLRBP48167 497 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ANXA11P50995 505 aaKnown RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ESRRGP62508 458 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 MBTD1Q05BQ5 628 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 PPP1R26Q5T8A7 1209 aaPredicted RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 FAM46CQ5VWP2 391 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CNKSR3Q6P9H4 555 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 C12orf29Q8N999 325 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 TRUB2O95900 331 aaKnown RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CNTFP26441 200 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 AP2B1P63010 937 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 SH3D19Q5HYK7 790 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 TRAPPC5Q8IUR0 188 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ING5Q8WYH8 240 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 SLC35C1Q96A29 364 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 NDEL1Q9GZM8 345 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CYP4F12Q9HCS2 524 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CATSPERZQ9NTU4 200 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ARHGAP20Q9P2F6 1191 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 APPL1Q9UKG1 709 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CCNT2O60583 730 aaKnown RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 SUPT7LO94864 414 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 HSPA1AP0DMV8 641 aaKnown RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 HSPA1BP0DMV9 641 aaKnown RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 GPR1P46091 355 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 SEC13P55735 322 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 GRTP1Q5TC63 336 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 PRUNE1Q86TP1 453 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ACTRT1Q8TDG2 376 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ING2Q9H160 280 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 PRDM16Q9HAZ2 1276 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 PGAM1P18669 254 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 GPC1P35052 558 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 KRT20P35900 424 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CD86P42081 329 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 GPM6BQ13491 265 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 RAB30Q15771 203 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 CCDC85BQ15834 202 aaPredicted RBP9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 RFX8Q6ZV50 586 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 NLRP9Q7RTR0 991 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 MMGT1Q8N4V1 131 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 GPAMQ9HCL2 828 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 SOHLH2Q9NX45 425 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 ADAM28Q9UKQ2 775 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 PCDHB9Q9Y5E1 797 aa9.24□□□□□ -0.93
MTHFD1-202ENST00000545908 NWD2Q9ULI1 1742 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 MYO1GB0I1T2 1018 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 OR4Q2P0C623 313 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 CSHL1Q14406 222 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 OTOAQ7RTW8 1153 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 SPATA21Q7Z572 469 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 KCNMB4Q86W47 210 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 HORMAD1Q86X24 394 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 OR5B17Q8NGF7 314 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 E2F7Q96AV8 911 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 HSFY1Q96LI6 401 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 CEP19Q96LK0 163 aa9.23□□□□□ -0.93
MTHFD1-202ENST00000545908 IL1RL2Q9HB29 575 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms