RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 STRIP2Q9ULQ0 834 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 FZD4Q9ULV1 537 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 SMC3Q9UQE7 1217 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 UBE4BO95155 1302 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 A0A1B0GVM2 712 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 TTC34A8MYJ7 566 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 LATO43561 262 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 OPA1O60313 960 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 HLA-DRAP01903 254 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 MYF5P13349 255 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 CD58P19256 250 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 CASP1P29466 404 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 METAP1P53582 386 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 ERVPABLB-1P60509 514 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 ZNF211Q13398 564 aaPredicted RBP9.77□□□□□ -0.85
CHD4-212ENST00000545083 COLEC12Q5KU26 742 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 C1orf220Q5T0J3 134 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 NAPEPLDQ6IQ20 393 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 RFWD3Q6PCD5 774 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 TMC6Q7Z403 805 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 PIGZQ86VD9 579 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 LSMEM2Q8N112 164 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 OXR1Q8N573 874 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 EXD3Q8N9H8 876 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 MFSD2AQ8NA29 543 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 OR14C36Q8NHC7 312 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 TTC17Q96AE7 1141 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 MYEOVQ96EZ4 313 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 FAM129BQ96TA1 746 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 OMDQ99983 421 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 DPH1Q9BZG8 443 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 UCKL1Q9NWZ5 548 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 TFIP11Q9UBB9 837 aaKnown RBP9.77□□□□□ -0.85
CHD4-212ENST00000545083 SFMBT1Q9UHJ3 866 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 CA5BQ9Y2D0 317 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 NOTCH2Q04721 2471 aa9.77□□□□□ -0.85
CHD4-212ENST00000545083 SPTAN1Q13813 2472 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 LY6G6EA0A0G2JKS1 128 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 GOLGA6L7A0A1B0GV03 622 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 PMS2P1A4D2B8 440 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 VPS37CA5D8V6 355 aaPredicted RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 TULP2O00295 520 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 TERTO14746 1132 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 MSI1O43347 362 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 EIF5BO60841 1220 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 RNASEH1O60930 286 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 CSO75390 466 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 GIMD1P0DJR0 217 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 GOT1P17174 413 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 MAT2AP31153 395 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 SLC6A4P31645 630 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 CSKP41240 450 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 PIK3CAP42336 1068 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 CTSOP43234 321 aaPredicted RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 PSMD8P48556 350 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 HARS2P49590 506 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 SKOR1P84550 965 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 DAB2P98082 770 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 NFKB2Q00653 900 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 NFATC3Q12968 1075 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 ZNF394Q53GI3 561 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 SLC45A4Q5BKX6 768 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 ADGRF1Q5T601 910 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 PM20D1Q6GTS8 502 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 MMS22LQ6ZRQ5 1243 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 ARHGAP18Q8N392 663 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 OR4C6Q8NH72 309 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 EDEM1Q92611 657 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 TAF4BQ92750 862 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 DEPDC7Q96QD5 511 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 ULBP1Q9BZM6 244 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 SLC39A2Q9NP94 309 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 DMAC2Q9NW81 257 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 HBS1LQ9Y450 684 aaKnown RBP9.76□□□□□ -0.85
CHD4-212ENST00000545083 U3KQA8 63 aa9.76□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3DA0A087WVF3 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3IA0A087WXS9 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3EA0A087X179 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3KA0A087X1G2 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3FA6NER0 549 aaPredicted RBP9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3LB9A6J9 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 FFAR2O15552 330 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBL1XO60907 577 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 ZBED1O96006 694 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3HP0C7X1 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 CKMT1AP12532 417 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 DGKAP23743 735 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 DRD3P35462 400 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TKTL1P51854 596 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 ZNF445P59923 1031 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 ST8SIA6P61647 398 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 ARID5BQ14865 1188 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 KNOP1Q1ED39 458 aaKnown RBP9.75□□□□□ -0.85
CHD4-212ENST00000545083 FAM133BQ5BKY9 247 aaKnown RBP9.75□□□□□ -0.85
CHD4-212ENST00000545083 PIK3R6Q5UE93 754 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3GQ6DHY5 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3CQ6IPX1 549 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 CNNM4Q6P4Q7 775 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms