RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 UGT1A8Q9HAW9 530 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 CXXC1Q9P0U4 656 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 RABGEF1Q9UJ41 708 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PRRC2BQ5JSZ5 2229 aaKnown RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 GCATO75600 419 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 GJB5O95377 273 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 HAPLN1P10915 354 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 HSPA8P11142 646 aaKnown RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 EN2P19622 333 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 LSP1P33241 339 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 MDH1P40925 334 aaKnown RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 USP41Q3LFD5 358 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 ALFQ53S48 1182 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 FBXO46Q6PJ61 603 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 ANKS3Q6ZW76 656 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 CFAP52Q8N1V2 620 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 XPO6Q96QU8 1125 aaKnown RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 FAM129AQ9BZQ8 928 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 CYP4F11Q9HBI6 524 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 KCNK9Q9NPC2 374 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 ARHGEF38Q9NXL2 777 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 KLHL8Q9P2G9 620 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 NYNRINQ9P2P1 1898 aaKnown RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 PTPRSQ13332 1948 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 A0A0A0MRY4 1105 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 SLC12A8A0AV02 714 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 E9PAM4 449 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 HOXA2O43364 376 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 JCHAINP01591 159 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 PTPN3P26045 913 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 RAP1GAP2Q684P5 730 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 TRMT10BQ6PF06 316 aaKnown RBP14.06□□□□□ -0.16
HCFC2-202ENST00000544223 SPATA13Q96N96 652 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 TEX264Q9Y6I9 313 aa14.06□□□□□ -0.16
HCFC2-202ENST00000544223 A0A087WUV0 522 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-202ENST00000544223 C5orf60A6NFR6 353 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 SLC38A8A6NNN8 435 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 ANKRD65E5RJM6 399 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 SHOX2O60902 331 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-202ENST00000544223 TIMP1P01033 207 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 SYN1P17600 705 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 CD68P34810 354 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-202ENST00000544223 TBX4P57082 545 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 SKOR1P84550 965 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 XRCC4Q13426 336 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 PDK1Q15118 436 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 KBTBD12Q3ZCT8 623 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 VSIG1Q86XK7 387 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 PSTKQ8IV42 348 aaKnown RBP14.05□□□□□ -0.16
HCFC2-202ENST00000544223 SPATA22Q8NHS9 363 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 GDAP1Q8TB36 358 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 SLC39A8Q9C0K1 460 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 TSPYL1Q9H0U9 437 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 GKN1Q9NS71 199 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.05□□□□□ -0.16
HCFC2-202ENST00000544223 RCOR3Q9P2K3 495 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-202ENST00000544223 TCRBV9S1A1TA0A576 114 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 KCNU1A8MYU2 1149 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 ZNF487B1APH4 448 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 CHADO15335 359 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 TLR5O60602 858 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 CASC4Q6P4E1 433 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 RELL1Q8IUW5 271 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 IGSF8Q969P0 613 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 WBP2Q969T9 261 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 ZNF512Q96ME7 567 aaPredicted RBP14.05□□□□□ -0.16
HCFC2-202ENST00000544223 CYP2S1Q96SQ9 504 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 YME1L1Q96TA2 773 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 FBXO44Q9H4M3 255 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 MARCH2Q9P0N8 246 aa14.05□□□□□ -0.16
HCFC2-202ENST00000544223 PLXNA3P51805 1871 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 EIF3HO15372 352 aaKnown RBP eCLIP14.04□□□□□ -0.16
HCFC2-202ENST00000544223 GJB3O75712 270 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 TPH1P17752 444 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 GARSP41250 739 aaKnown RBP14.04□□□□□ -0.16
HCFC2-202ENST00000544223 MS4A13Q5J8X5 152 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 ARHGAP12Q8IWW6 846 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 BCAS4Q8TDM0 211 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 TMEM169Q96HH4 297 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 PRMT1Q99873 361 aaKnown RBP14.04□□□□□ -0.16
HCFC2-202ENST00000544223 TMEM175Q9BSA9 504 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 SMYD2Q9NRG4 433 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 ACTL7AQ9Y615 435 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 COL4A4P53420 1690 aaPredicted RBP14.04□□□□□ -0.16
HCFC2-202ENST00000544223 TMEM120BA0PK00 339 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 CFAP69A5D8W1 941 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 C2orf78A6NCI8 922 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 RASA4BC9J798 803 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 E7ESA3 106 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 NRG2O14511 850 aaPredicted RBP14.04□□□□□ -0.16
HCFC2-202ENST00000544223 PPP1R12AO14974 1030 aaPredicted RBP14.04□□□□□ -0.16
HCFC2-202ENST00000544223 RASA4O43374 803 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 MT-CYBP00156 380 aaPredicted RBP14.04□□□□□ -0.16
HCFC2-202ENST00000544223 IRF1P10914 325 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 NFKB1P19838 968 aa14.04□□□□□ -0.16
HCFC2-202ENST00000544223 MAGEA11P43364 429 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms