RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CCSER2Q9H7U1 834 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 CYP4F11Q9HBI6 524 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 YIPF1Q9Y548 306 aa20.4■□□□□ 0.86
COPS7A-218ENST00000543939 MKI67P46013 3256 aaKnown RBP20.4■□□□□ 0.86
COPS7A-218ENST00000543939 E9PAM4 449 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 TLR5O60602 858 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 LILRB3O75022 631 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 CSH1P0DML2 217 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 CSH2P0DML3 217 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 TPSB2P20231 275 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 GARSP41250 739 aaKnown RBP20.39■□□□□ 0.86
COPS7A-218ENST00000543939 SEMA5AQ13591 1074 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 TPSAB1Q15661 275 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 MIB1Q86YT6 1006 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 ZNF683Q8IZ20 524 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 FIBCD1Q8N539 461 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 MCUQ8NE86 351 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 TLCD1Q96CP7 247 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 MYRFLQ96LU7 910 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 WDR83Q9BRX9 315 aaKnown RBP20.39■□□□□ 0.86
COPS7A-218ENST00000543939 MRPL17Q9NRX2 175 aaKnown RBP20.39■□□□□ 0.86
COPS7A-218ENST00000543939 FNIP2Q9P278 1114 aa20.39■□□□□ 0.86
COPS7A-218ENST00000543939 BCCIPQ9P287 314 aaKnown RBP eCLIP20.39■□□□□ 0.86
COPS7A-218ENST00000543939 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.39■□□□□ 0.86
COPS7A-218ENST00000543939 SLC12A8A0AV02 714 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 TLDC2A0PJX2 215 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 FGF18O76093 207 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 APRTP07741 180 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 DNAJB2P25686 324 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 FDFT1P37268 417 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 TUBP50607 506 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 RING1Q06587 406 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 SYCP2LQ5T4T6 812 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 EMC10Q5UCC4 262 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 ATP6V0D2Q8N8Y2 350 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 BTN2A3PQ96KV6 586 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 CDK5RAP1Q96SZ6 601 aaKnown RBP20.39■□□□□ 0.85
COPS7A-218ENST00000543939 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.39■□□□□ 0.85
COPS7A-218ENST00000543939 CXXC1Q9P0U4 656 aaPredicted RBP20.39■□□□□ 0.85
COPS7A-218ENST00000543939 STK39Q9UEW8 545 aa20.39■□□□□ 0.85
COPS7A-218ENST00000543939 NOVA2Q9UNW9 492 aaKnown RBP20.39■□□□□ 0.85
COPS7A-218ENST00000543939 PLXNA4Q9HCM2 1894 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 A0A087WUV0 522 aaPredicted RBP20.38■□□□□ 0.85
COPS7A-218ENST00000543939 WASH4PA8MWX3 477 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 ALDH1A3P47895 512 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 AUHQ13825 339 aaKnown RBP20.38■□□□□ 0.85
COPS7A-218ENST00000543939 STAT4Q14765 748 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 LONRF1Q17RB8 773 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 BBS9Q3SYG4 887 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 MS4A13Q5J8X5 152 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 TMEM240Q5SV17 173 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 ANKMY2Q8IV38 441 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 ARHGAP12Q8IWW6 846 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 ZNF567Q8N184 647 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 LZTR1Q8N653 840 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 PYROXD1Q8WU10 500 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 CLP1Q92989 425 aaKnown RBP20.38■□□□□ 0.85
COPS7A-218ENST00000543939 SERPINB12Q96P63 405 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 ZBP1Q9H171 429 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 RXFP1Q9HBX9 757 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 SEPT10Q9P0V9 454 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 SLC12A6Q9UHW9 1150 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 ANAPC1Q9H1A4 1944 aa20.38■□□□□ 0.85
COPS7A-218ENST00000543939 ZNF840PA6NDX5 716 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 SMIM23A6NLE4 172 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 MTSS1O43312 755 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 NR1D1P20393 614 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 PTPN3P26045 913 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 SLCO1A2P46721 670 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 KPNA1P52294 538 aaPredicted RBP20.37■□□□□ 0.85
COPS7A-218ENST00000543939 ZNF33AQ06730 810 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 TNFAIP8L3Q5GJ75 292 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 KDM7AQ6ZMT4 941 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 TCEAL8Q8IYN2 117 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 RTL3Q8N8U3 475 aaKnown RBP20.37■□□□□ 0.85
COPS7A-218ENST00000543939 DPF3Q92784 378 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 TRMT2BQ96GJ1 504 aaKnown RBP20.37■□□□□ 0.85
COPS7A-218ENST00000543939 CELF6Q96J87 481 aaKnown RBP20.37■□□□□ 0.85
COPS7A-218ENST00000543939 ZNF512Q96ME7 567 aaPredicted RBP20.37■□□□□ 0.85
COPS7A-218ENST00000543939 IGSF9Q9P2J2 1179 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 MAFFQ9ULX9 164 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 HBS1LQ9Y450 684 aaKnown RBP20.37■□□□□ 0.85
COPS7A-218ENST00000543939 INSL6Q9Y581 213 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 CLUHO75153 1309 aa20.37■□□□□ 0.85
COPS7A-218ENST00000543939 KCNK1O00180 336 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 TEX28O15482 410 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 RGS16O15492 202 aaPredicted RBP20.36■□□□□ 0.85
COPS7A-218ENST00000543939 CTSAP10619 480 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 GPX6P59796 221 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 PARP6Q2NL67 630 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 TADA2BQ86TJ2 420 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 CAND1Q86VP6 1230 aaKnown RBP20.36■□□□□ 0.85
COPS7A-218ENST00000543939 FBXO36Q8NEA4 188 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 DEPDC1BQ8WUY9 529 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 CCDC77Q9BR77 488 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 CEP41Q9BYV8 373 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 PSD3Q9NYI0 1048 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 PPARGC1AQ9UBK2 798 aaKnown RBP20.36■□□□□ 0.85
COPS7A-218ENST00000543939 DNMT3LQ9UJW3 386 aa20.36■□□□□ 0.85
COPS7A-218ENST00000543939 TEX264Q9Y6I9 313 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms