RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 NUMBP49757 651 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 CDH4P55283 916 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 OXCT1P55809 520 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 CCZ1BP86790 482 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 CCZ1P86791 482 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 SCAPQ12770 1279 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 KCNT1Q5JUK3 1230 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 TMEM31Q5JXX7 168 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 DGKKQ5KSL6 1271 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 MPP7Q5T2T1 576 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 C6orf118Q5T5N4 469 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 RNF219Q5W0B1 726 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 NAIF1Q69YI7 327 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 SDE2Q6IQ49 451 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 BNIPLQ7Z465 357 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 ANKS1BQ7Z6G8 1248 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 TFAP2DQ7Z6R9 452 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 FAM217AQ8IXS0 508 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 AHI1Q8N157 1196 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 CCAR2Q8N163 923 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 PYROXD2Q8N2H3 581 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 NIPA2Q8N8Q9 360 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 KCTD6Q8NC69 237 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 IGSF8Q969P0 613 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 PRICKLE1Q96MT3 831 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 PPP1R9BQ96SB3 815 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 PRMT1Q99873 361 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 SNRNP25Q9BV90 132 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 SLC2A11Q9BYW1 496 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 MUC3BQ9H195 1237 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 CATSPERBQ9H7T0 1116 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 LZTFL1Q9NQ48 299 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 ANLNQ9NQW6 1124 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.51□□□□□ -1.37
LTBR-212ENST00000543542 ABCB8Q9NUT2 735 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 MPP6Q9NZW5 540 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 KIAA1522Q9P206 1035 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 GGA2Q9UJY4 613 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 GUCA1BQ9UMX6 200 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.51□□□□□ -1.37
LTBR-212ENST00000543542 REXO2Q9Y3B8 237 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 HYOU1Q9Y4L1 999 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 ADGRG1Q9Y653 693 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 RCCD1A6NED2 376 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 BTNL10A8MVZ5 291 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FAM72CH0Y354 149 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TRIM24O15164 1050 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FGF10O15520 208 aaPredicted RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 PJA2O43164 708 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ZSCAN12O43309 604 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 BUB1BO60566 1050 aaPredicted RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 ATG13O75143 517 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 RNF40O75150 1001 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 MTA2O94776 668 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 CNTN5O94779 1100 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 LRIG2O94898 1065 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 KRT1P04264 644 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ATP5BP06576 529 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 RARAP10276 462 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PABPC1P11940 636 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 GOT1P17174 413 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TARSP26639 723 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 L1CAMP32004 1257 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 MAN1A1P33908 653 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TIE1P35590 1138 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TNFRSF4P43489 277 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 CDH6P55285 790 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ST8SIA6P61647 398 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 LMAN2Q12907 356 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 E2F5Q15329 346 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 CA9Q16790 459 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FBXO43Q4G163 708 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FNDC3BQ53EP0 1204 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 ALFQ53S48 1182 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 C2orf27AQ580R0 203 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TMEM196Q5HYL7 178 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FAM72AQ5TYM5 149 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 IL31Q6EBC2 164 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ASTLQ6HA08 431 aaPredicted RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 FAM72DQ6L9T8 149 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FSTL4Q6MZW2 842 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 CHST9Q7L1S5 443 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TRMT11Q7Z4G4 463 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 FAM72BQ86X60 149 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PSTKQ8IV42 348 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 CCDC50Q8IVM0 306 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 MAP7D3Q8IWC1 876 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 RHOT1Q8IXI2 618 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ETFBKMTQ8IXQ9 262 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 SYCE1Q8N0S2 351 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FBXL6Q8N531 539 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ARFGAP1Q8N6T3 406 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ZNF513Q8N8E2 541 aaPredicted RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 TERB1Q8NA31 727 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PJA1Q8NG27 643 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 RPLP0P6Q8NHW5 317 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 FIBINQ8TAL6 211 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 KIAA1524Q8TCG1 905 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms