RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	DEUP1	Q05D60	604 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	THOC5	Q13769	683 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	PDE1C	Q14123	709 aa	Predicted RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	ZNF618	Q5T7W0	954 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	TEDDM1	Q5T9Z0	273 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	GRTP1	Q5TC63	336 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	SNX30	Q5VWJ9	437 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	BSPRY	Q5W0U4	402 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	LRRC74B	Q6ZQY2	392 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	RBM15B	Q8NDT2	890 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	PIWIL2	Q8TC59	973 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	WDR60	Q8WVS4	1066 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	NT5C3B	Q969T7	300 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	MAML3	Q96JK9	1138 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	OSBPL1A	Q9BXW6	950 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	C20orf27	Q9GZN8	174 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	SYBU	Q9NX95	663 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	ZFAT	Q9P243	1243 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	ADAM28	Q9UKQ2	775 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	ANGPTL2	Q9UKU9	493 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	RAD54B	Q9Y620	910 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	KAT6A	Q92794	2004 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525		M0QYT0	321 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	TM7SF2	O76062	418 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	TOP3B	O95985	862 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	GSR	P00390	522 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	FAM163B	P0C2L3	166 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	FGF3	P11487	239 aa	Predicted RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	NPR3	P17342	541 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	GP5	P40197	560 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	AIF1	P55008	147 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	MRPS35	P82673	323 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	MXRA7	P84157	204 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	KDSR	Q06136	332 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	TRMT5	Q32P41	509 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	MDH1B	Q5I0G3	518 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	RFX8	Q6ZV50	586 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	BNIPL	Q7Z465	357 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	OSTM1	Q86WC4	334 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	ZNF567	Q8N184	647 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	SIX6OS1	Q8N1H7	587 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	NDRG1	Q92597	394 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	WNT8B	Q93098	351 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	SLC2A13	Q96QE2	648 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	CPNE1	Q99829	537 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	TINF2	Q9BSI4	451 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	C1orf21	Q9H246	121 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	PRDM12	Q9H4Q4	367 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	NMRK1	Q9NWW6	199 aa		13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	ABT1	Q9ULW3	272 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	APOBEC2	Q9Y235	224 aa	Known RBP	13.84	□□□□□ -0.19
PPME1-208	ENST00000543525	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	PROC	P04070	461 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	SKI	P12755	728 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	PTPN1	P18031	435 aa	Known RBP	13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	MX2	P20592	715 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	TYK2	P29597	1187 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	EPHX2	P34913	555 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	DPYS	Q14117	519 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	OTUD1	Q5VV17	481 aa	Predicted RBP	13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	ANO7	Q6IWH7	933 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	PID1	Q7Z2X4	250 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	GPR142	Q7Z601	462 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	SLC9A7	Q96T83	725 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	MED10	Q9BTT4	135 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	BEGAIN	Q9BUH8	593 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	LRRC40	Q9H9A6	602 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	COX16	Q9P0S2	106 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	SLC17A6	Q9P2U8	582 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	PLA2G4C	Q9UP65	541 aa		13.83	□□□□□ -0.2
PPME1-208	ENST00000543525	THSD7B	Q9C0I4	1608 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	PRR5-ARHGAP8	B1AHC4	643 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	ITM2A	O43736	263 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	FBXO21	O94952	628 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	AOC1	P19801	751 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	CDC25C	P30307	473 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	LILRA4	P59901	499 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	ARHGAP8	P85298	464 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	NME3	Q13232	169 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	GRB14	Q14449	540 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	PCLAF	Q15004	111 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	SNX17	Q15036	470 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	CCDC153	Q494R4	210 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	CERS2	Q96G23	380 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	EBF4	Q9BQW3	602 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	CEP41	Q9BYV8	373 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	RNF39	Q9H2S5	420 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	DNAJC28	Q9NX36	388 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	RPS6KL1	Q9Y6S9	549 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	PDCD11	Q14690	1871 aa	Known RBP	13.82	□□□□□ -0.2
PPME1-208	ENST00000543525		A6NHS1	94 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	UNCX	A6NJT0	531 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	DCLK1	O15075	740 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	NCAM2	O15394	837 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	DYNC1LI2	O43237	492 aa	Predicted RBP	13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	MAP3K7	O43318	606 aa		13.82	□□□□□ -0.2
PPME1-208	ENST00000543525	TBX10	O75333	385 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms