RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TLR5O60602 858 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 TMEM63AO94886 807 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 MYZAPP0CAP1 466 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 MAGEA4P43358 317 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 ALDH1A3P47895 512 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 ARL4CP56559 192 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 ZNF33AQ06730 810 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 PPIDQ08752 370 aaKnown RBP9.6□□□□□ -0.87
GNE-206ENST00000543356 IFFO1Q0D2I5 559 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 VEPH1Q14D04 833 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 ZKSCAN8Q15776 578 aaPredicted RBP9.6□□□□□ -0.87
GNE-206ENST00000543356 HIF1AQ16665 826 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 KLHDC10Q6PID8 442 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 HERC6Q8IVU3 1022 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 C7orf61Q8IZ16 206 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 LZTR1Q8N653 840 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 BTN2A3PQ96KV6 586 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 SPATA13Q96N96 652 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 LGMNQ99538 433 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 RAD9AQ99638 391 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 ZBED2Q9BTP6 218 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 PRDM12Q9H4Q4 367 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 RAB6BQ9NRW1 208 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 CXXC1Q9P0U4 656 aaPredicted RBP9.6□□□□□ -0.87
GNE-206ENST00000543356 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 SLC12A6Q9UHW9 1150 aa9.6□□□□□ -0.87
GNE-206ENST00000543356 XPO7Q9UIA9 1087 aaKnown RBP9.6□□□□□ -0.87
GNE-206ENST00000543356 MAGED2Q9UNF1 606 aaPredicted RBP9.6□□□□□ -0.87
GNE-206ENST00000543356 HMGB1P1B2RPK0 211 aaPredicted RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 E9PAM4 449 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ALOX15BO15296 676 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 MTSS1O43312 755 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 OPHN1O60890 802 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 SHBGP04278 402 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 TPSB2P20231 275 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 PPP3CCP48454 512 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 TUBP50607 506 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 MLLT6P55198 1093 aaPredicted RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 AP1B1Q10567 949 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 PLD1Q13393 1074 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 TPSAB1Q15661 275 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 UBAP2Q5T6F2 1119 aaKnown RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 AGBL2Q5U5Z8 902 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 PIK3R6Q5UE93 754 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ARHGEF18Q6ZSZ5 1173 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ZNF683Q8IZ20 524 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ZNF513Q8N8E2 541 aaPredicted RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 ARL8AQ96BM9 186 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 P2RY11Q96G91 374 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 SIK2Q9H0K1 926 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 CCSER2Q9H7U1 834 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 SAYSD1Q9NPB0 183 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 DNAJC17Q9NVM6 304 aaKnown RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 VPS18Q9P253 973 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 PPARGC1AQ9UBK2 798 aaKnown RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 CLUHO75153 1309 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 TCRBV7S3A2A0A539 114 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ZNF840PA6NDX5 716 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 RNF103O00237 685 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 TEX28O15482 410 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 MOCS2O96007 188 aaPredicted RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 SRGAP2BP0DMP2 458 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 DNAJB2P25686 324 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ELF1P32519 619 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 FDFT1P37268 417 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 GARSP41250 739 aaKnown RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 COG7P83436 770 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 SEMA5AQ13591 1074 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ANKRD20A2Q5SQ80 823 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ANKRD20A1Q5TYW2 823 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ANKRD20A3Q5VUR7 823 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 NUGGCQ68CJ6 796 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 RWDD4Q6NW29 188 aaKnown RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 CCDC33Q8N5R6 958 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 OTUD6BQ8N6M0 293 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 LRRN4Q8WUT4 740 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 AUTS2Q8WXX7 1259 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ITFG2Q969R8 447 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 EXOC4Q96A65 974 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ATP6V1G3Q96LB4 118 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 ROPN1BQ9BZX4 212 aaPredicted RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 ROPN1Q9HAT0 212 aaPredicted RBP9.59□□□□□ -0.87
GNE-206ENST00000543356 DNMT3LQ9UJW3 386 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 LZTS1Q9Y250 596 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 INSL5Q9Y5Q6 135 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 SLC4A7Q9Y6M7 1214 aa9.59□□□□□ -0.87
GNE-206ENST00000543356 IGLV3-10A0A075B6K4 115 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 SLC12A8A0AV02 714 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 GOLGA6CA6NDK9 693 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 PRRG1O14668 218 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 ACSL3O95573 720 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TBX18O95935 607 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 GOLGA6DP0CG33 693 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TSHRP16473 764 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 WASHC5Q12768 1159 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TWF1Q12792 350 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 KYNUQ16719 465 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 KRT71Q3SY84 523 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 MS4A13Q5J8X5 152 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 239.8 ms