RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ZNF557Q8N988 423 aaPredicted RBP12.49□□□□□ -0.41
PTPN6-220ENST00000543115 SHC3Q92529 594 aa12.49□□□□□ -0.41
PTPN6-220ENST00000543115 SNX19Q92543 992 aa12.49□□□□□ -0.41
PTPN6-220ENST00000543115 DDX50Q9BQ39 737 aaKnown RBP12.49□□□□□ -0.41
PTPN6-220ENST00000543115 ZDHHC5Q9C0B5 715 aa12.49□□□□□ -0.41
PTPN6-220ENST00000543115 THAP9Q9H5L6 903 aa12.49□□□□□ -0.41
PTPN6-220ENST00000543115 POPDC2Q9HBU9 364 aa12.49□□□□□ -0.41
PTPN6-220ENST00000543115 SIX2Q9NPC8 291 aa12.49□□□□□ -0.41
PTPN6-220ENST00000543115 APEX2Q9UBZ4 518 aa12.49□□□□□ -0.41
PTPN6-220ENST00000543115 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.49□□□□□ -0.41
PTPN6-220ENST00000543115 A0A1B0GVT2 93 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 TYW5A2RUC4 315 aaKnown RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 SEMA4FO95754 770 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 DNTTP04053 509 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 PNMA6AP0CW24 399 aaPredicted RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 TACR2P21452 398 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 PON1P27169 355 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 USP8P40818 1118 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 CSNK1EP49674 416 aaKnown RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 ZBTB16Q05516 673 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 EXOC3L4Q17RC7 722 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 HNRNPA1L2Q32P51 320 aaKnown RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 ZNF776Q68DI1 518 aaPredicted RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 LAYNQ6UX15 382 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 CHSY1Q86X52 802 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 CIR1Q86X95 450 aaPredicted RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 DHX40Q8IX18 779 aaKnown RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 APCDD1Q8J025 514 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 DEFB106AQ8N104 65 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 CHCHD4Q8N4Q1 142 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 BIRC7Q96CA5 298 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 CPXM1Q96SM3 734 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 PRMT1Q99873 361 aaKnown RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 ORAI3Q9BRQ5 295 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 BTBD1Q9H0C5 482 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 PCED1AQ9H1Q7 454 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 RSPH9Q9H1X1 276 aaPredicted RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 GAREM1Q9H706 876 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 FBRSQ9HAH7 460 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 SERGEFQ9UGK8 458 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 SUN2Q9UH99 717 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 ZMIZ1Q9ULJ6 1067 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 ERVW-1Q9UQF0 538 aa12.48□□□□□ -0.41
PTPN6-220ENST00000543115 FNDC3AQ9Y2H6 1198 aaKnown RBP12.48□□□□□ -0.41
PTPN6-220ENST00000543115 ASCC3Q8N3C0 2202 aaKnown RBP12.47□□□□□ -0.41
PTPN6-220ENST00000543115 TTC34A8MYJ7 566 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 H0Y626 953 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 CBFA2T3O75081 653 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 GRAP2O75791 330 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 APOEP02649 317 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 ASLP04424 464 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 ST8SIA6P61647 398 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 TRIP6Q15654 476 aaKnown RBP12.47□□□□□ -0.41
PTPN6-220ENST00000543115 HLA-BQ31612 363 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 KDF1Q8NAX2 398 aaPredicted RBP12.47□□□□□ -0.41
PTPN6-220ENST00000543115 BTN2A3PQ96KV6 586 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 SLC2A13Q96QE2 648 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 TM9SF3Q9HD45 589 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 TM7SF3Q9NS93 570 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 KIAA1522Q9P206 1035 aaPredicted RBP12.47□□□□□ -0.41
PTPN6-220ENST00000543115 SLCO3A1Q9UIG8 710 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 PCDHGC3Q9UN70 934 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 NEUROG3Q9Y4Z2 214 aa12.47□□□□□ -0.41
PTPN6-220ENST00000543115 SYNJ2BP-COX16A0A087WUM0 186 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 GTPBP10A4D1E9 387 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 KCNU1A8MYU2 1149 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 MID1O15344 667 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 FSBPO95073 299 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 ERBB2P04626 1255 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 IGHV4-34P06331 123 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 MZF1P28698 734 aaPredicted RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 MATKP42679 507 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 MTIF2P46199 727 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 STK19P49842 368 aaPredicted RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 IRAK1P51617 712 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 HNRNPDQ14103 355 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 ARID5BQ14865 1188 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 CST6Q15828 149 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 KIF19Q2TAC6 998 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 TTC31Q49AM3 519 aaPredicted RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 KCNT1Q5JUK3 1230 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 DPY19L2P1Q6NXN4 242 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 FAM183BPQ6ZVS7 135 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 RAB44Q7Z6P3 723 aaPredicted RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 CCAR2Q8N163 923 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 PNPLA1Q8N8W4 532 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 ATP6V0D2Q8N8Y2 350 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 MLKLQ8NB16 471 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 KDM1BQ8NB78 822 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 C1orf131Q8NDD1 294 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 OR52K2Q8NGK3 314 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 PPP1R13BQ96KQ4 1090 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 RPL10LQ96L21 214 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 FAM81BQ96LP2 452 aa12.46□□□□□ -0.41
PTPN6-220ENST00000543115 PABPC3Q9H361 631 aaKnown RBP12.46□□□□□ -0.41
PTPN6-220ENST00000543115 FAM204AQ9H8W3 233 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms