RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	NETO2	Q8NC67	525 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	CDH19	Q9H159	772 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	SYBU	Q9NX95	663 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	MTMR10	Q9NXD2	777 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	DPP3	Q9NY33	737 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	CLIC5	Q9NZA1	410 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	PCDHB12	Q9Y5F1	795 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	CDY2A	Q9Y6F7	541 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	CDY1	Q9Y6F8	540 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	SMIM31	A0A1B0GVY4	71 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	MCF2	P10911	925 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	EDNRB	P24530	442 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	MLH1	P40692	756 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	RBP5	P82980	135 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	CCDC153	Q494R4	210 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	EPGN	Q6UW88	154 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	TMEM110	Q86TL2	294 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	AGR3	Q8TD06	166 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	NMD3	Q96D46	503 aa	Known RBP	13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	ATXN7L3B	Q96GX2	97 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	CEP41	Q9BYV8	373 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	SNX15	Q9NRS6	342 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	GGA3	Q9NZ52	723 aa		13.26	□□□□□ -0.29
DDX11-223	ENST00000542838	GABBR2	O75899	941 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	GOT1	P17174	413 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	ACAT1	P24752	427 aa	Known RBP	13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	GP5	P40197	560 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	PKDCC	Q504Y2	493 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	LRRC23	Q53EV4	343 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	POTEA	Q6S8J7	498 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	TMC7	Q7Z402	723 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	CCDC185	Q8N715	623 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	CLEC4C	Q8WTT0	213 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	DCUN1D1	Q96GG9	259 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	LENG8	Q96PV6	779 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	NDUFA13	Q9P0J0	144 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	SEPT10	Q9P0V9	454 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	PSMD13	Q9UNM6	376 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	LOC285556	D6RIA3	1793 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	AIM2	O14862	343 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	DGKI	O75912	1065 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	SPATA31D3	P0C874	917 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	SH3BGR	P55822	239 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	SPATA31D4	Q6ZUB0	917 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	PLPPR4	Q7Z2D5	763 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	MICALL2	Q8IY33	904 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	PLD6	Q8N2A8	252 aa	Known RBP	13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	PYROXD2	Q8N2H3	581 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	PQLC1	Q8N2U9	271 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	DCLK2	Q8N568	766 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	TTC39C	Q8N584	583 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	MAPK15	Q8TD08	544 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	PGBD4	Q96DM1	585 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	OCEL1	Q9H607	264 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	SSX2IP	Q9Y2D8	614 aa		13.25	□□□□□ -0.29
DDX11-223	ENST00000542838	SERPINB5	P36952	375 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	PTPN9	P43378	593 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	SNAPC2	Q13487	334 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	MAP7	Q14244	749 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	TLR1	Q15399	786 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	GRTP1	Q5TC63	336 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	ISLR2	Q6UXK2	745 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	NAPRT	Q6XQN6	538 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	HACE1	Q8IYU2	909 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	SLC35F5	Q8WV83	523 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	PDZD7	Q9H5P4	517 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	RPS6KL1	Q9Y6S9	549 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	HACD1	B0YJ81	288 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	AP1G1	O43747	822 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	POLB	P06746	335 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	SETSIP	P0DME0	302 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	PSMB4	P28070	264 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	PML	P29590	882 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	ARL4A	P40617	200 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	PHKA2	P46019	1235 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	NUDT2	P50583	147 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	IGBP1	P78318	339 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	R3HDM1	Q15032	1099 aa	Known RBP	13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	ARMC3	Q5W041	872 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	TDRD5	Q8NAT2	981 aa	Known RBP	13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	CERS2	Q96G23	380 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	MPP4	Q96JB8	637 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	PGLYRP2	Q96PD5	576 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	OR52B2	Q96RD2	323 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	CPNE1	Q99829	537 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	MRPL45	Q9BRJ2	306 aa	Known RBP	13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	NAT9	Q9BTE0	207 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.24	□□□□□ -0.29
DDX11-223	ENST00000542838		A0A087WZ62	844 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	GOLGA8Q	A0A0J9YX86	632 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	GOLGA8O	A6NCC3	632 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	GOLGA8N	F8WBI6	632 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	RNF103	O00237	685 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	CREB3	O43889	395 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	SMIM18	P0DKX4	95 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	SNX16	P57768	344 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	CNGA3	Q16281	694 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms