RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 ZNF419Q96HQ0 510 aaPredicted RBP18.06■□□□□ 0.48
LTBR-210ENST00000542830 GANQ9H2C0 597 aa18.06■□□□□ 0.48
LTBR-210ENST00000542830 TMEM9BQ9NQ34 198 aa18.06■□□□□ 0.48
LTBR-210ENST00000542830 TMEM74BQ9NUR3 256 aa18.06■□□□□ 0.48
LTBR-210ENST00000542830 WSB2Q9NYS7 404 aaPredicted RBP18.06■□□□□ 0.48
LTBR-210ENST00000542830 KIAA1522Q9P206 1035 aaPredicted RBP18.06■□□□□ 0.48
LTBR-210ENST00000542830 STAP1Q9ULZ2 295 aa18.06■□□□□ 0.48
LTBR-210ENST00000542830 SPTBN2O15020 2390 aa18.06■□□□□ 0.48
LTBR-210ENST00000542830 SYNJ2BP-COX16A0A087WUM0 186 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 PATE3B3GLJ2 98 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 H0Y626 953 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 TM4SF5O14894 197 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 IGLV3-19P01714 112 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 C7P10643 843 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 CSKP41240 450 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 MATKP42679 507 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 GABRB2P47870 512 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 TPMTP51580 245 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 IRX4P78413 519 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 PPM1JQ5JR12 505 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 RABGAP1LQ5R372 815 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 NOP9Q86U38 636 aaKnown RBP18.05■□□□□ 0.48
LTBR-210ENST00000542830 ERICH1Q86X53 443 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 SLC41A1Q8IVJ1 513 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 DEFB119Q8N690 84 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 KDM1BQ8NB78 822 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 EPS8L1Q8TE68 723 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 TOE1Q96GM8 510 aaKnown RBP18.05■□□□□ 0.48
LTBR-210ENST00000542830 HSPA12BQ96MM6 686 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 CD93Q9NPY3 652 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.05■□□□□ 0.48
LTBR-210ENST00000542830 COX16Q9P0S2 106 aa18.05■□□□□ 0.48
LTBR-210ENST00000542830 CNOT1A5YKK6 2376 aaKnown RBP18.05■□□□□ 0.48
LTBR-210ENST00000542830 TNRC6BQ9UPQ9 1833 aaKnown RBP18.05■□□□□ 0.48
LTBR-210ENST00000542830 ATXN2Q99700 1313 aaKnown RBP18.04■□□□□ 0.48
LTBR-210ENST00000542830 PI4KAP42356 2102 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 C4orf47A7E2U8 309 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 M0QYT0 321 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 COPB1P53618 953 aaKnown RBP18.04■□□□□ 0.48
LTBR-210ENST00000542830 OXCT1P55809 520 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 POLR2FP61218 127 aaKnown RBP18.04■□□□□ 0.48
LTBR-210ENST00000542830 ZBTB16Q05516 673 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 NME3Q13232 169 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 SLC12A1Q13621 1099 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 PITRM1Q5JRX3 1037 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 WDR45BQ5MNZ6 344 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 CADM4Q8NFZ8 388 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 PRMT1Q99873 361 aaKnown RBP18.04■□□□□ 0.48
LTBR-210ENST00000542830 NUP58Q9BVL2 599 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 FAM207AQ9NSI2 230 aaPredicted RBP18.04■□□□□ 0.48
LTBR-210ENST00000542830 SUSD2Q9UGT4 822 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 LIMA1Q9UHB6 759 aaKnown RBP18.04■□□□□ 0.48
LTBR-210ENST00000542830 PAXBP1Q9Y5B6 917 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 CEP192Q8TEP8 1941 aa18.04■□□□□ 0.48
LTBR-210ENST00000542830 NCOR2Q9Y618 2525 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 A0A1B0GVM2 712 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 TCAF2A6NFQ2 919 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 LGALS16A8MUM7 142 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 F9P00740 461 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 CFIP05156 583 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 SRPRAP08240 638 aaKnown RBP18.03■□□□□ 0.48
LTBR-210ENST00000542830 CDK11BP21127 795 aaKnown RBP18.03■□□□□ 0.48
LTBR-210ENST00000542830 SOX5P35711 763 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 FSCBQ5H9T9 825 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 BRMS1LQ5PSV4 323 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 FAM102AQ5T9C2 384 aaPredicted RBP18.03■□□□□ 0.48
LTBR-210ENST00000542830 SND1Q7KZF4 910 aaKnown RBP eCLIP18.03■□□□□ 0.48
LTBR-210ENST00000542830 RGL4Q8IZJ4 473 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 SPAG5Q96R06 1193 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 PPP1R9BQ96SB3 815 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 NPY6RQ99463 290 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 NAT10Q9H0A0 1025 aaKnown RBP18.03■□□□□ 0.48
LTBR-210ENST00000542830 PRSS16Q9NQE7 514 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 INTS6Q9UL03 887 aaKnown RBP18.03■□□□□ 0.48
LTBR-210ENST00000542830 SLC6A14Q9UN76 642 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 SIK3Q9Y2K2 1263 aa18.03■□□□□ 0.48
LTBR-210ENST00000542830 MUC22E2RYF6 1773 aaPredicted RBP18.03■□□□□ 0.48
LTBR-210ENST00000542830 LRRC10BA6NIK2 292 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 CDX4O14627 284 aaPredicted RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 GFPT2O94808 682 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 MMEP08473 750 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 SERPINF2P08697 491 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 GNSP15586 552 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 STAT1P42224 750 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 KLK7P49862 253 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 JAM2P57087 298 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 RNASE9P60153 205 aaKnown RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 NOMO3P69849 1222 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 GFPT1Q06210 699 aaPredicted RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 AUHQ13825 339 aaKnown RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 ARID5BQ14865 1188 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 PLEKHG6Q3KR16 790 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 TTC31Q49AM3 519 aaPredicted RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 ACBD5Q5T8D3 534 aaPredicted RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 RNF219Q5W0B1 726 aaPredicted RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 XYLT1Q86Y38 959 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 CCAR2Q8N163 923 aaKnown RBP18.02■□□□□ 0.48
LTBR-210ENST00000542830 ZNF366Q8N895 744 aa18.02■□□□□ 0.48
LTBR-210ENST00000542830 NT5C3BQ969T7 300 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms