RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GARSP41250 739 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 ANXA11P50995 505 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 TIRAPP58753 221 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 EIF4A1P60842 406 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 DLX2Q07687 328 aaPredicted RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 NEXNQ0ZGT2 675 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 MTAPQ13126 283 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 SEMA3BQ13214 749 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 BFSP2Q13515 415 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 NAA25Q14CX7 972 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 GLIPR1L2Q4G1C9 344 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 PREPLQ4J6C6 727 aaPredicted RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 RUNDC3AQ59EK9 446 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 PLEKHS1Q5SXH7 462 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 RBM20Q5T481 1227 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 LRCH2Q5VUJ6 765 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM90A2PQ658T7 463 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 IQCA1Q86XH1 822 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 ABRAQ8N0Z2 381 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 METTL25Q8N6Q8 603 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 TXNDC5Q8NBS9 432 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 TNIP2Q8NFZ5 429 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 OR52N2Q8NGI0 321 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 NOC3LQ8WTT2 800 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 OSCP1Q8WVF1 389 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 OVCA2Q8WZ82 227 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 ST8SIA2Q92186 375 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 NPIPB3Q92617 1050 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 JAKMIP1Q96N16 626 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 TMPRSS5Q9H3S3 457 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 RABEP2Q9H5N1 569 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 AGO3Q9H9G7 860 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 PDE11AQ9HCR9 933 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 PDE7BQ9NP56 450 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 TLR8Q9NR97 1041 aaKnown RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 ABCF3Q9NUQ8 709 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 ZNF70Q9UC06 446 aaPredicted RBP4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 CD207Q9UJ71 328 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 SSX2IPQ9Y2D8 614 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 BIVM-ERCC5R4GMW8 1640 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 IQGAP2Q13576 1575 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 TTC37Q6PGP7 1564 aa4.23□□□□□ -1.73
SFSWAP-211ENST00000542813 UHRF1BP1Q6BDS2 1440 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 LTBP4Q8N2S1 1624 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 A0A1W2PQ09 198 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 MYO1GB0I1T2 1018 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 M0QZQ0 153 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 GRM8O00222 908 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 SYN3O14994 580 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 ADAM20O43506 726 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 SEC14L2O76054 403 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 URODP06132 367 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 SCG2P13521 617 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 COX7A2P14406 83 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 HOXC13P31276 330 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 CTCFP49711 727 aaPredicted RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 DGKQP52824 942 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 EIF3BP55884 814 aaKnown RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 UFM1P61960 85 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 PSMC6P62333 389 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 CBFBQ13951 182 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 AASDHQ4L235 1098 aaPredicted RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 NCEH1Q6PIU2 408 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM83HQ6ZRV2 1179 aaPredicted RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 TMPRSS9Q7Z410 1059 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 DNAJB7Q7Z6W7 309 aaPredicted RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 MON1AQ86VX9 555 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 IZUMO1Q8IYV9 350 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 GPR135Q8IZ08 494 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 SCML4Q8N228 414 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 AVL9Q8NBF6 648 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 SUPT20HQ8NEM7 779 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 NCSTNQ92542 709 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 RNFT2Q96EX2 444 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 C5orf34Q96MH7 638 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 LBHD1Q9BQE6 289 aaPredicted RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 HTATIP2Q9BUP3 242 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 MRPL9Q9BYD2 267 aaKnown RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 CTDSP1Q9GZU7 261 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 C12orf65Q9H3J6 166 aaKnown RBP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 EHD2Q9NZN4 543 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 MPP6Q9NZW5 540 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 ACAD8Q9UKU7 415 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 SLC12A4Q9UP95 1085 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 OSGIN2Q9Y236 505 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 MYRFQ9Y2G1 1151 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 PCDHGB5Q9Y5G0 923 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM169AQ9Y6X4 670 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 AATKQ6ZMQ8 1374 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 NEO1Q92859 1461 aa4.22□□□□□ -1.73
SFSWAP-211ENST00000542813 AKNAQ7Z591 1439 aa4.21□□□□□ -1.73
SFSWAP-211ENST00000542813 DISP1Q96F81 1524 aa4.21□□□□□ -1.73
SFSWAP-211ENST00000542813 SH3D21A4FU49 640 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 TRIM64A6NGJ6 449 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 TRIM64BA6NI03 449 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 TEX22C9J3V5 150 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 F5H697 171 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 K7ESM1 405 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms