RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 AASDHQ4L235 1098 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 C6orf10Q5SRN2 563 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 C1orf220Q5T0J3 134 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 PPP1R26Q5T8A7 1209 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 RNF220Q5VTB9 566 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 SLC27A1Q6PCB7 646 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 PACS1Q6VY07 963 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 RINLQ6ZS11 566 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 RELL1Q8IUW5 271 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 C10orf107Q8IVU9 208 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 KIAA0319LQ8IZA0 1049 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF786Q8N393 782 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 URGCPQ8TCY9 931 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 SH3TC2Q8TF17 1288 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 COPS5Q92905 334 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 TUBGCP3Q96CW5 907 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 CELF6Q96J87 481 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 PRPF18Q99633 342 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 COPS7BQ9H9Q2 264 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 MORF4L1Q9UBU8 362 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 MAFBQ9Y5Q3 323 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 UBR2Q8IWV8 1755 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 TJP1Q07157 1748 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 RGSL1A5PLK6 1076 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 HDAC3O15379 428 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 NDUFS3O75489 264 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 ZNF286BP0CG31 522 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 CCDC130P13994 396 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 GOT1P17174 413 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 MAP4P27816 1152 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 CCNHP51946 323 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 USP4Q13107 963 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 LCLAT1Q6UWP7 414 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 PLPPR4Q7Z2D5 763 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 RIOX2Q8IUF8 465 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 ZDHHC14Q8IZN3 488 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 CLEC4FQ8N1N0 589 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 CMASQ8NFW8 434 aaPredicted RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 PHF21BQ96EK2 531 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 B3GNT5Q9BYG0 378 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 ADNPQ9H2P0 1102 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 GPAMQ9HCL2 828 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 RNF19AQ9NV58 838 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 SETD4Q9NVD3 440 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 PNPOQ9NVS9 261 aa8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 RBM22Q9NW64 420 aaKnown RBP eCLIP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 HBS1LQ9Y450 684 aaKnown RBP8.39□□□□□ -1.07
PRKAB1-207ENST00000542698 ERI2A8K979 691 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 CILPO75339 1184 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 PTPN7P35236 360 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 ALDH1A3P47895 512 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 KLF1Q13351 362 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 LBRQ14739 615 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 IMPG1Q17R60 797 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 IL31Q6EBC2 164 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 RFWD3Q6PCD5 774 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 ISLR2Q6UXK2 745 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 MARK2Q7KZI7 788 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 ANKRD52Q8NB46 1076 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 EDEM1Q92611 657 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 VAT1Q99536 393 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 ELOVL4Q9GZR5 314 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 BRD8Q9H0E9 1235 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 PRDM16Q9HAZ2 1276 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 CLIC5Q9NZA1 410 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 NKX1-2Q9UD57 310 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 LNPEPQ9UIQ6 1025 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 TIAM2Q8IVF5 1701 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 BCLAF3A2AJT9 711 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 HEATR9A2RTY3 570 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 TBX10O75333 385 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 YBX3P16989 372 aaKnown RBP eCLIP8.38□□□□□ -1.074e-13■■□□□ 11.8
PRKAB1-207ENST00000542698 IVDP26440 423 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 CD151P48509 253 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 SIX1Q15475 284 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 SPOUT1Q5T280 376 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 NIPA2Q8N8Q9 360 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 WNT8BQ93098 351 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 ACE2Q9BYF1 805 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 IL22Q9GZX6 179 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 DDX18Q9NVP1 670 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 CCDC167Q9P0B6 97 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 RNF181Q9P0P0 153 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 TJP2Q9UDY2 1190 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 USP1O94782 785 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 PGM3O95394 542 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 CTSHP09668 335 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 SP100P23497 879 aaPredicted RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 PSMA4P25789 261 aaKnown RBP8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 IL1R2P27930 398 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 CHN2P52757 468 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 NRLP54845 237 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 KCNK10P57789 538 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 GPX6P59796 221 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 PDK3Q15120 406 aa8.38□□□□□ -1.07
PRKAB1-207ENST00000542698 GRIK4Q16099 956 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms