RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 COCHO43405 550 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 CREB3O43889 395 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 LRIG2O94898 1065 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 FGF19O95750 216 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 APOEP02649 317 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 HNRNPA1P09651 372 aaKnown RBP eCLIP9.53□□□□□ -0.88
LDHA-220ENST00000542179 RBP3P10745 1247 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 JUNDP17535 347 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 ERCC2P18074 760 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 EPHA5P54756 1037 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 TPI1P60174 286 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 EIF3EP60228 445 aaKnown RBP9.53□□□□□ -0.88
LDHA-220ENST00000542179 COG7P83436 770 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 PPM1LQ5SGD2 360 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 ARTNQ5T4W7 220 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 PDZD4Q76G19 769 aaPredicted RBP9.53□□□□□ -0.88
LDHA-220ENST00000542179 TMC8Q8IU68 726 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 UNC45BQ8IWX7 931 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 CCDC89Q8N998 374 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 LEMD2Q8NC56 503 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 CASKIN2Q8WXE0 1202 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 PLD4Q96BZ4 506 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 OLFM3Q96PB7 478 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 FAM129AQ9BZQ8 928 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 RETREG1Q9H6L5 497 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 ZNF334Q9HCZ1 680 aaPredicted RBP9.53□□□□□ -0.88
LDHA-220ENST00000542179 PPARGC1AQ9UBK2 798 aaKnown RBP9.53□□□□□ -0.88
LDHA-220ENST00000542179 HS3ST4Q9Y661 456 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 CLUHO75153 1309 aa9.53□□□□□ -0.88
LDHA-220ENST00000542179 IGLV3-10A0A075B6K4 115 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 CFAP69A5D8W1 941 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ZSCAN5CA6NGD5 496 aaPredicted RBP9.52□□□□□ -0.89
LDHA-220ENST00000542179 DRGXA6NNA5 263 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 WASH4PA8MWX3 477 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 HACD1B0YJ81 288 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 H0YGN5 161 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 NCAM2O15394 837 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 DAPK3O43293 454 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 KRT14P02533 472 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ITIH2P19823 946 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 IVDP26440 423 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 EPHB2P29323 1055 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ECHS1P30084 290 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 CDC25CP30307 473 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 CARSP49589 748 aaKnown RBP9.52□□□□□ -0.89
LDHA-220ENST00000542179 GBE1Q04446 702 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 SLC10A2Q12908 348 aaPredicted RBP9.52□□□□□ -0.89
LDHA-220ENST00000542179 TRADDQ15628 312 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 C5orf22Q49AR2 442 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 MAP9Q49MG5 647 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 MS4A13Q5J8X5 152 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 PIK3R6Q5UE93 754 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 C1orf228Q6PIY5 440 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ELMSAN1Q6PJG2 1045 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 TMCO3Q6UWJ1 677 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 NPNTQ6UXI9 565 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 MIB1Q86YT6 1006 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 CDKL3Q8IVW4 592 aaPredicted RBP9.52□□□□□ -0.89
LDHA-220ENST00000542179 ZNF683Q8IZ20 524 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 LZTR1Q8N653 840 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 BBOF1Q8ND07 529 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 AENQ8WTP8 325 aaKnown RBP9.52□□□□□ -0.89
LDHA-220ENST00000542179 HAUS1Q96CS2 278 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 TBC1D31Q96DN5 1066 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 RTP4Q96DX8 246 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 PRMT1Q99873 361 aaKnown RBP9.52□□□□□ -0.89
LDHA-220ENST00000542179 FAM118BQ9BPY3 351 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 TRIM51Q9BSJ1 452 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 KLF16Q9BXK1 252 aaPredicted RBP9.52□□□□□ -0.89
LDHA-220ENST00000542179 NACA2Q9H009 215 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 BRD8Q9H0E9 1235 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 RNF38Q9H0F5 515 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 NKX2-4Q9H2Z4 354 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 CATSPERBQ9H7T0 1116 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 SLC28A3Q9HAS3 691 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 USP29Q9HBJ7 922 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ARFGAP3Q9NP61 516 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ETNK2Q9NVF9 386 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ZDHHC7Q9NXF8 308 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 DONSONQ9NYP3 566 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 DTLQ9NZJ0 730 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 WHRNQ9P202 907 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 NEU3Q9UQ49 428 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 HEY1Q9Y5J3 304 aa9.52□□□□□ -0.89
LDHA-220ENST00000542179 ESYT3A0FGR9 886 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 TTC24A2A3L6 582 aaPredicted RBP9.51□□□□□ -0.89
LDHA-220ENST00000542179 C2orf78A6NCI8 922 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 E9PAM4 449 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 NDC80O14777 642 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 LATS1O95835 1130 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 PTPN2P17706 415 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 DDX6P26196 483 aaKnown RBP eCLIP9.51□□□□□ -0.896e-9■□□□□ 8.2
LDHA-220ENST00000542179 GABRR2P28476 465 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 SERPINB6P35237 376 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 RPL21P46778 160 aaKnown RBP9.51□□□□□ -0.89
LDHA-220ENST00000542179 HARS2P49590 506 aaKnown RBP9.51□□□□□ -0.89
LDHA-220ENST00000542179 SLC7A9P82251 487 aa9.51□□□□□ -0.89
LDHA-220ENST00000542179 CAV1Q03135 178 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms