RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PPP1R7Q15435 360 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 MAP9Q49MG5 647 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 OTOP3Q7RTS5 596 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 ZNF446Q9NWS9 450 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 GDE1Q9NZC3 331 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 NFU1Q9UMS0 254 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 ZNF148Q9UQR1 794 aa28.69■■■□□ 2.18
CCM2-218ENST00000541586 DRG1Q9Y295 367 aaKnown RBP28.69■■■□□ 2.18
CCM2-218ENST00000541586 GAS8O95995 478 aa28.68■■■□□ 2.18
CCM2-218ENST00000541586 SYDE1Q6ZW31 735 aaPredicted RBP28.68■■■□□ 2.18
CCM2-218ENST00000541586 TADA2BQ86TJ2 420 aa28.68■■■□□ 2.18
CCM2-218ENST00000541586 MIB1Q86YT6 1006 aa28.68■■■□□ 2.18
CCM2-218ENST00000541586 ARID3BQ8IVW6 561 aaPredicted RBP28.68■■■□□ 2.18
CCM2-218ENST00000541586 SERPINB11Q96P15 392 aa28.68■■■□□ 2.18
CCM2-218ENST00000541586 SMPD4Q9NXE4 827 aa28.68■■■□□ 2.18
CCM2-218ENST00000541586 ANAPC1Q9H1A4 1944 aa28.68■■■□□ 2.18
CCM2-218ENST00000541586 TGM2P21980 687 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 TUBP50607 506 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 LMNB2Q03252 620 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 C1orf228Q6PIY5 440 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 AENQ8WTP8 325 aaKnown RBP28.67■■■□□ 2.18
CCM2-218ENST00000541586 P3H4Q92791 437 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 CDK5RAP1Q96SZ6 601 aaKnown RBP28.67■■■□□ 2.18
CCM2-218ENST00000541586 FAM114A2Q9NRY5 505 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 ARHGEF38Q9NXL2 777 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 DNMT3LQ9UJW3 386 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 NEU2Q9Y3R4 380 aa28.67■■■□□ 2.18
CCM2-218ENST00000541586 FAM72CH0Y354 149 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 H3BRJ5 948 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 CREB3O43889 395 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 ITGAVP06756 1048 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 LAMP2P13473 410 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 DRG2P55039 364 aaKnown RBP28.66■■■□□ 2.18
CCM2-218ENST00000541586 SEMA3BQ13214 749 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 PTK6Q13882 451 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 NOMO1Q15155 1222 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 BRMS1LQ5PSV4 323 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 FAM72AQ5TYM5 149 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 FAM72DQ6L9T8 149 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 FAM72BQ86X60 149 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 EIF1ADQ8N9N8 165 aaKnown RBP28.66■■■□□ 2.18
CCM2-218ENST00000541586 AMPD1P23109 780 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 ECHS1P30084 290 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 CCR1P32246 355 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 FAM78AQ5JUQ0 283 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 GSTA5Q7RTV2 222 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 ARHGEF4Q9NR80 690 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 GKN1Q9NS71 199 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 OLA1Q9NTK5 396 aaKnown RBP28.66■■■□□ 2.18
CCM2-218ENST00000541586 SNX24Q9Y343 169 aa28.66■■■□□ 2.18
CCM2-218ENST00000541586 OBSL1O75147 1896 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 C2CD4DB7Z1M9 353 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 EEF2KO00418 725 aaKnown RBP28.65■■■□□ 2.18
CCM2-218ENST00000541586 ZFXP17010 805 aaPredicted RBP28.65■■■□□ 2.18
CCM2-218ENST00000541586 EIF3EP60228 445 aaKnown RBP28.65■■■□□ 2.18
CCM2-218ENST00000541586 HLTFQ14527 1009 aaKnown RBP eCLIP28.65■■■□□ 2.18
CCM2-218ENST00000541586 PPP2R5DQ14738 602 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 DENND4CQ5VZ89 1909 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 ALLCQ8N6M5 410 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 TDRD5Q8NAT2 981 aaKnown RBP28.65■■■□□ 2.18
CCM2-218ENST00000541586 TMEM121Q9BTD3 319 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 MARCH2Q9P0N8 246 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 ZMYM5Q9UJ78 669 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 CCL26Q9Y258 94 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 TLR6Q9Y2C9 796 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 HEY1Q9Y5J3 304 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 CPQQ9Y646 472 aa28.65■■■□□ 2.18
CCM2-218ENST00000541586 MCF2LO15068 1137 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 HMBSP08397 361 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 RPL21P46778 160 aaKnown RBP28.64■■■□□ 2.18
CCM2-218ENST00000541586 TRIP13Q15645 432 aaPredicted RBP28.64■■■□□ 2.18
CCM2-218ENST00000541586 RFX8Q6ZV50 586 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 SMARCD2Q92925 531 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 ASB16Q96NS5 453 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 TDP1Q9NUW8 608 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 ETNK2Q9NVF9 386 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 TMEM51Q9NW97 253 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 SNX10Q9Y5X0 201 aa28.64■■■□□ 2.18
CCM2-218ENST00000541586 VIPR2P41587 438 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 DPYSQ14117 519 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 NCBP2-AS2Q69YL0 99 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 ZNF276Q8N554 614 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 ATXN2LQ8WWM7 1075 aaKnown RBP28.63■■■□□ 2.17
CCM2-218ENST00000541586 NEUROG2Q9H2A3 272 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 C10orf88Q9H8K7 445 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 OR12D3Q9UGF7 316 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 ASIC3Q9UHC3 531 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 SLC12A8A0AV02 714 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 SOBPA7XYQ1 873 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 PRAMEF12O95522 483 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 RBP3P10745 1247 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 IRF1P10914 325 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 ZXDBP98169 803 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 KLHDC10Q6PID8 442 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 USP13Q92995 863 aaPredicted RBP28.63■■■□□ 2.17
CCM2-218ENST00000541586 SLC39A13Q96H72 371 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 HAPLN3Q96S86 360 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 OSBPL2Q9H1P3 480 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 PRDM16Q9HAZ2 1276 aa28.63■■■□□ 2.17
CCM2-218ENST00000541586 GRHL1Q9NZI5 618 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms