RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SIGLEC16A6NMB1 481 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 ADCY5O95622 1261 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 TPM3P06753 285 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 GZMAP12544 262 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 GABRG2P18507 467 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 IL12RB1P42701 662 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 ZBED6P86452 979 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 LMAN2Q12907 356 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 ZNF234Q14588 700 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 PTPRNQ16849 979 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 FUT11Q495W5 492 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 PPP1R15BQ5SWA1 713 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 MBLAC2Q68D91 279 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 KIAA1211LQ6NV74 962 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 ZNF571Q7Z3V5 609 aaPredicted RBP13.54□□□□□ -0.24
LTBR-208ENST00000541005 ZNF683Q8IZ20 524 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 MCOLN2Q8IZK6 566 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 CFAP52Q8N1V2 620 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 EMC1Q8N766 993 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 CENPIQ92674 756 aaPredicted RBP13.54□□□□□ -0.24
LTBR-208ENST00000541005 TTC17Q96AE7 1141 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 LOXL4Q96JB6 756 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 C1orf74Q96LT6 269 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 CIPCQ9C0C6 399 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 TKTL2Q9H0I9 626 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 TMEM245Q9H330 911 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 HAUS4Q9H6D7 363 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 ANLNQ9NQW6 1124 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 STIM2Q9P246 746 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 CAPN11Q9UMQ6 739 aa13.54□□□□□ -0.24
LTBR-208ENST00000541005 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 ASLP04424 464 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 GYPCP04921 128 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 RETP07949 1114 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 DLDP09622 509 aaKnown RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 KRT3P12035 628 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 PDGFRAP16234 1089 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 TNFAIP3P21580 790 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 PRKCHP24723 683 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 SDC4P31431 198 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 WASP42768 502 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 OXCT1P55809 520 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 SLC12A1Q13621 1099 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 CCDC14Q49A88 953 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 USP39Q53GS9 565 aaKnown RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 FSCBQ5H9T9 825 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 ARTNQ5T4W7 220 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 HGSNATQ68CP4 663 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 DNAJC24Q6P3W2 148 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 CEP68Q76N32 757 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 CCDC117Q8IWD4 279 aaPredicted RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 CCAR2Q8N163 923 aaKnown RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 CARNMT1Q8N4J0 409 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 FAM160A2Q8N612 972 aaPredicted RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 KDM1BQ8NB78 822 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 JOSD2Q8TAC2 188 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 HMGB4Q8WW32 186 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 RXFP2Q8WXD0 754 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 SORCS1Q8WY21 1168 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 IGSF8Q969P0 613 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 HAPLN3Q96S86 360 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 SELENOOQ9BVL4 669 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 TPSD1Q9BZJ3 242 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 XPO4Q9C0E2 1151 aaKnown RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 TAS2R14Q9NYV8 317 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 KIAA1522Q9P206 1035 aaPredicted RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 INTS6Q9UL03 887 aaKnown RBP13.53□□□□□ -0.24
LTBR-208ENST00000541005 VANGL2Q9ULK5 521 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 CFAP54Q96N23 3096 aa13.53□□□□□ -0.24
LTBR-208ENST00000541005 WASH3PC4AMC7 463 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 DDX3XO00571 662 aaKnown RBP eCLIP13.52□□□□□ -0.25
LTBR-208ENST00000541005 LRP3O75074 770 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 GJB6O95452 261 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 POLR2EP19388 210 aaKnown RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 NDUFV2P19404 249 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 GPD1P21695 349 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 RRM1P23921 792 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 RFC1P35251 1148 aaPredicted RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 P2RY2P41231 377 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 CSKP41240 450 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 PLK1P53350 603 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 NRG1Q02297 640 aaPredicted RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 CAMK2GQ13555 558 aaPredicted RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 STARD3Q14849 445 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 ARID5BQ14865 1188 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 MAP7D1Q3KQU3 841 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 PLEKHG6Q3KR16 790 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 PLK5Q496M5 336 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 PITRM1Q5JRX3 1037 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 CXorf57Q6NSI4 855 aaKnown RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 SERPINA13PQ6UXR4 307 aa13.52□□□□□ -0.25
LTBR-208ENST00000541005 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.52□□□□□ -0.25
LTBR-208ENST00000541005 KBTBD6Q86V97 674 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms