RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TBC1D3HP0C7X1 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 PGM5Q15124 567 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3GQ6DHY5 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3CQ6IPX1 549 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 MYLK4Q86YV6 388 aaPredicted RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 TBC1D3Q8IZP1 549 aaPredicted RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 VCPIP1Q96JH7 1222 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 RTKNQ9BST9 563 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 POT1Q9NUX5 634 aa6.78□□□□□ -1.32
YBX3-210ENST00000540975 AGO2Q9UKV8 859 aaKnown RBP6.78□□□□□ -1.32
YBX3-210ENST00000540975 EFCAB8A8MWE9 144 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 ACTL6BO94805 426 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 CDK7P50613 346 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 PNLIPRP1P54315 467 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 AWAT2Q6E213 333 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 SLC44A2Q8IWA5 706 aaPredicted RBP6.77□□□□□ -1.33
YBX3-210ENST00000540975 SLC44A5Q8NCS7 719 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 SCAMP5Q8TAC9 235 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 CLEC4CQ8WTT0 213 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 POF1BQ8WVV4 589 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 MSI2Q96DH6 328 aaKnown RBP6.77□□□□□ -1.33
YBX3-210ENST00000540975 RMDN3Q96TC7 470 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 MLXIPQ9HAP2 919 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 LIN7CQ9NUP9 197 aaKnown RBP6.77□□□□□ -1.33
YBX3-210ENST00000540975 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.77□□□□□ -1.33
YBX3-210ENST00000540975 LRFN1Q9P244 771 aa6.77□□□□□ -1.33
YBX3-210ENST00000540975 KIR2DS5A0A0G2JLQ3 304 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 KIR2DS3K7RE56 304 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 TRIM38O00635 465 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 CSTBP04080 98 aaKnown RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 AP2B1P63010 937 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 CHAF1AQ13111 956 aaPredicted RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 NFRKBQ6P4R8 1299 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 CCDC117Q8IWD4 279 aaPredicted RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 MMP21Q8N119 569 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 PAQR4Q8N4S7 273 aaPredicted RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 ZNF366Q8N895 744 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 VPS37AQ8NEZ2 397 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 ATP2A3Q93084 1043 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 HTATIP2Q9BUP3 242 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 SORBS1Q9BX66 1292 aaKnown RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 BRD8Q9H0E9 1235 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 OSBPL5Q9H0X9 879 aaPredicted RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 PABPC3Q9H361 631 aaKnown RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 TXNRD2Q9NNW7 524 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 SEMA4BQ9NPR2 832 aaPredicted RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 PRDM8Q9NQV8 689 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 DACT1Q9NYF0 836 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 MSRB1Q9NZV6 116 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 UTS2RQ9UKP6 389 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 DAPP1Q9UN19 280 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 PCDHA10Q9Y5I2 948 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 COPG1Q9Y678 874 aaKnown RBP6.76□□□□□ -1.33
YBX3-210ENST00000540975 CACNA1IQ9P0X4 2223 aa6.76□□□□□ -1.33
YBX3-210ENST00000540975 A0A1W2PPC1 479 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 WNT1P04628 370 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 RHBDL3P58872 404 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 RNASELQ05823 741 aaKnown RBP6.75□□□□□ -1.33
YBX3-210ENST00000540975 ZNF260Q3ZCT1 412 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 LEXMQ3ZCV2 418 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 KIAA1755Q5JYT7 1200 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 KLHL17Q6TDP4 642 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 THSD1Q9NS62 852 aa6.75□□□□□ -1.33
YBX3-210ENST00000540975 ZNF335Q9H4Z2 1342 aaPredicted RBP6.75□□□□□ -1.33
YBX3-210ENST00000540975 DPPA5A6NC42 116 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 MBD3L5A6NJ08 208 aaPredicted RBP6.74□□□□□ -1.33
YBX3-210ENST00000540975 ACKR2O00590 384 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 TULP3O75386 442 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 FGF2P09038 288 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 DLGAP5Q15398 846 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 TBRG1Q3YBR2 411 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 CCDC38Q502W7 563 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 PIK3CD-AS1Q5SR53 167 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 MANEAQ5SRI9 462 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 ISM2Q6H9L7 571 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 RAB11FIP2Q7L804 512 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 PIM3Q86V86 326 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 COG5Q9UP83 839 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 LAMP3Q9UQV4 416 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 LZTS1Q9Y250 596 aa6.74□□□□□ -1.33
YBX3-210ENST00000540975 AGAP5A6NIR3 686 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 ATG13O75143 517 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 CIITAP33076 1130 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 CCT4P50991 539 aaKnown RBP6.73□□□□□ -1.33
YBX3-210ENST00000540975 ADPRHP54922 357 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 SMTNL2Q2TAL5 461 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 LIN54Q6MZP7 749 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 CACNA2D3Q8IZS8 1091 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 STT3BQ8TCJ2 826 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 OTUD7AQ8TE49 926 aaPredicted RBP6.73□□□□□ -1.33
YBX3-210ENST00000540975 NPAS1Q99742 590 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 TMEM120AQ9BXJ8 343 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 ELAC1Q9H777 363 aaKnown RBP6.73□□□□□ -1.33
YBX3-210ENST00000540975 AAMDCQ9H7C9 122 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 IL21RQ9HBE5 538 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 PCDHA12Q9UN75 941 aa6.73□□□□□ -1.33
YBX3-210ENST00000540975 A0A0G2JK05 382 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 MYMKA6NI61 221 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 NDUFB8O95169 186 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 NFATC1O95644 943 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms