RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.38
CD9-209ENST00000540891 TIMM44O43615 452 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 PDGFRAP16234 1089 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 GABRG2P18507 467 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 RRM1P23921 792 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 PRKCHP24723 683 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 KLHL30Q0D2K2 578 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 MTA1Q13330 715 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 PTPRNQ16849 979 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 C5orf22Q49AR2 442 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 PPP1R15BQ5SWA1 713 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 MBLAC2Q68D91 279 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 PRR23BQ6ZRT6 265 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 FAM131BQ86XD5 332 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 ZNF683Q8IZ20 524 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 DCLK2Q8N568 766 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 ZNF557Q8N988 423 aaPredicted RBP17.45■□□□□ 0.38
CD9-209ENST00000540891 CYB5D2Q8WUJ1 264 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 SELENOOQ9BVL4 669 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 VANGL2Q9ULK5 521 aa17.45■□□□□ 0.38
CD9-209ENST00000540891 SIGLEC16A6NMB1 481 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 TMCO5BA8MYB1 307 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 DCLK1O15075 740 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 NPC1O15118 1278 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 ALDH1A2O94788 518 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 SDC4P31431 198 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 PTPN9P43378 593 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 ZBED6P86452 979 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 CDH18Q13634 790 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 CDO1Q16878 200 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 SDE2Q6IQ49 451 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 CXorf57Q6NSI4 855 aaKnown RBP17.44■□□□□ 0.38
CD9-209ENST00000540891 WDR59Q6PJI9 974 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 SND1Q7KZF4 910 aaKnown RBP eCLIP17.44■□□□□ 0.381e-7■■■■□ 24.8
CD9-209ENST00000540891 CCAR2Q8N163 923 aaKnown RBP17.44■□□□□ 0.38
CD9-209ENST00000540891 CPLX3Q8WVH0 158 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 HMGB4Q8WW32 186 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 CENPIQ92674 756 aaPredicted RBP17.44■□□□□ 0.38
CD9-209ENST00000540891 SYN2Q92777 582 aaPredicted RBP17.44■□□□□ 0.38
CD9-209ENST00000540891 TTC17Q96AE7 1141 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 RPRD1AQ96P16 312 aaPredicted RBP17.44■□□□□ 0.38
CD9-209ENST00000540891 SIK2Q9H0K1 926 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 TMEM245Q9H330 911 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 INVSQ9Y283 1065 aa17.44■□□□□ 0.38
CD9-209ENST00000540891 A0A1B0GVM2 712 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 TCAF2A6NFQ2 919 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 H0Y626 953 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 NDUFV2P19404 249 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 GPD1P21695 349 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 HDAC4P56524 1084 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 RPL7AP62424 266 aaKnown RBP17.43■□□□□ 0.38
CD9-209ENST00000540891 PITRM1Q5JRX3 1037 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 RABGAP1LQ5R372 815 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 TTC39BQ5VTQ0 682 aaPredicted RBP17.43■□□□□ 0.38
CD9-209ENST00000540891 DNAJC24Q6P3W2 148 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 CEP68Q76N32 757 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 STRADAQ7RTN6 431 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 KBTBD6Q86V97 674 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 APCDD1Q8J025 514 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 FAM160A2Q8N612 972 aaPredicted RBP17.43■□□□□ 0.38
CD9-209ENST00000540891 OR52K2Q8NGK3 314 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 RLN3Q8WXF3 142 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 RUBCNQ92622 972 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 IQCDQ96DY2 449 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 MYO19Q96H55 970 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 VCPIP1Q96JH7 1222 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 C1orf74Q96LT6 269 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 SLC6A17Q9H1V8 727 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 TMEM51Q9NW97 253 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 KIAA1522Q9P206 1035 aaPredicted RBP17.43■□□□□ 0.38
CD9-209ENST00000540891 PAXBP1Q9Y5B6 917 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 OTOGLQ3ZCN5 2332 aa17.43■□□□□ 0.38
CD9-209ENST00000540891 ATMINO43313 823 aaPredicted RBP17.42■□□□□ 0.38
CD9-209ENST00000540891 CNTN5O94779 1100 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 PLEKP08567 350 aaPredicted RBP17.42■□□□□ 0.38
CD9-209ENST00000540891 DLDP09622 509 aaKnown RBP17.42■□□□□ 0.38
CD9-209ENST00000540891 GZMAP12544 262 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 HLA-EP13747 358 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 BCKDHBP21953 392 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 CASP14P31944 242 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 P2RY2P41231 377 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 CSKP41240 450 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 OGDHQ02218 1023 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 MAP7D1Q3KQU3 841 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 PLK5Q496M5 336 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 ALFQ53S48 1182 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 LAIR1Q6GTX8 287 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 PPP1R2P3Q6NXS1 205 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 FRMD1Q8N878 549 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 ZC3H10Q96K80 434 aaKnown RBP17.42■□□□□ 0.38
CD9-209ENST00000540891 MRGPRX3Q96LB0 322 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 MRGPRX1Q96LB2 322 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 MCEEQ96PE7 176 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 HAPLN3Q96S86 360 aa17.42■□□□□ 0.38
CD9-209ENST00000540891 DUSP15Q9H1R2 295 aaPredicted RBP17.42■□□□□ 0.38
CD9-209ENST00000540891 BCCIPQ9P287 314 aaKnown RBP eCLIP17.42■□□□□ 0.38
CD9-209ENST00000540891 LUC7L2Q9Y383 392 aaKnown RBP17.42■□□□□ 0.38
CD9-209ENST00000540891 IGLV3-10A0A075B6K4 115 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 DRGXA6NNA5 263 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 AP5Z1O43299 807 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms