RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 FAM237AA0A1B0GTK4 181 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 K7ELQ4 463 aaPredicted RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 O00370 1275 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 MID1O15344 667 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 YKT6O15498 198 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 IRAK2O43187 625 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 CALUO43852 315 aaPredicted RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 SIN3BO75182 1162 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 LDOC1O95751 146 aaPredicted RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 ATP5BP06576 529 aaKnown RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 PLA2G2AP14555 144 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 CSKP41240 450 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 ME1P48163 572 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 DAOAP59103 153 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 ARID5AQ03989 594 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 TLE3Q04726 772 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 ADIGQ0VDE8 80 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 BST2Q10589 180 aaKnown RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 TARDBPQ13148 414 aaKnown RBP eCLIP7.59□□□□□ -1.19
YBX3-209ENST00000540747 ILKQ13418 452 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 GSE1Q14687 1217 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 CST6Q15828 149 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 GOLGA7BQ2TAP0 167 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 PRAMEF14Q5SWL7 426 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 HES3Q5TGS1 186 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 ATL3Q6DD88 541 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 RFWD3Q6PCD5 774 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 ERICH1Q86X53 443 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 SPATS2Q86XZ4 545 aaKnown RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 CEP57L1Q8IYX8 460 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 GUF1Q8N442 669 aaKnown RBP7.59□□□□□ -1.19
YBX3-209ENST00000540747 ZNF843Q8N446 348 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 AADATQ8N5Z0 425 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 DCBLD1Q8N8Z6 715 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 FBXL13Q8NEE6 735 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 OR2T34Q8NGX1 318 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 FIBINQ8TAL6 211 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 EDEM1Q92611 657 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 EEF2KMTQ96G04 330 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 DCBLD2Q96PD2 775 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 ZSWIM1Q9BR11 485 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 NEUROG2Q9H2A3 272 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 ERVMER34-1Q9H9K5 563 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 CNGB3Q9NQW8 809 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 FOXD4L1Q9NU39 408 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 RAB20Q9NX57 234 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 FBXL12Q9NXK8 326 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 TSPAN16Q9UKR8 245 aa7.59□□□□□ -1.19
YBX3-209ENST00000540747 UBR5O95071 2799 aaPredicted RBP7.59□□□□□ -1.2
YBX3-209ENST00000540747 SHROOM3Q8TF72 1996 aa7.59□□□□□ -1.2
YBX3-209ENST00000540747 GOLGA6L7A0A1B0GV03 622 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 A0A1W2PP55 124 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 TARSL2A2RTX5 802 aaKnown RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 EIF4E1BA6NMX2 242 aaKnown RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 ACSL4O60488 711 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 TBL1XO60907 577 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 F13A1P00488 732 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 ASLP04424 464 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 FYNP06241 537 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 PRR29P0C7W0 189 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 SETSIPP0DME0 302 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 ZSCAN22P10073 491 aaPredicted RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 JUPP14923 745 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 PFKFB1P16118 471 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 POLR2EP19388 210 aaKnown RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 CMA1P23946 247 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 CD38P28907 300 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 DRD3P35462 400 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 HNF1BP35680 557 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 PSMC2P35998 433 aaKnown RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 CTSOP43234 321 aaPredicted RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 MXI1P50539 228 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 ADPRHP54922 357 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 C21orf59P57076 290 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 PPP2CBP62714 309 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 PPP2CAP67775 309 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 DPYDQ12882 1025 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 EDRF1Q3B7T1 1238 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 PROX2Q3B8N5 592 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 CBWD6Q4V339 395 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 CCDC157Q569K6 752 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 FSCBQ5H9T9 825 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 CBWD3Q5JTY5 395 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 CBWD5Q5RIA9 395 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 C6orf118Q5T5N4 469 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 NUGGCQ68CJ6 796 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 ADAT2Q7Z6V5 191 aaKnown RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 ZNF557Q8N988 423 aaPredicted RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 HJURPQ8NCD3 748 aaPredicted RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 SLC35F5Q8WV83 523 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 IRGQQ8WZA9 623 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 TFAP2BQ92481 460 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 SLC39A13Q96H72 371 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 FCRL2Q96LA5 508 aaPredicted RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 FCRL3Q96P31 734 aaPredicted RBP7.58□□□□□ -1.2
YBX3-209ENST00000540747 DNAI2Q9GZS0 605 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 GDF3Q9NR23 364 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 ABCC13Q9NSE7 274 aa7.58□□□□□ -1.2
YBX3-209ENST00000540747 ARHGAP20Q9P2F6 1191 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms