RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TNIP3Q96KP6 325 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 PRPF18Q99633 342 aaKnown RBP4.11□□□□□ -1.75
MDM2-227ENST00000540709 SFXN1Q9H9B4 322 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 FBXO4Q9UKT5 387 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 TRPC5Q9UL62 973 aaPredicted RBP4.11□□□□□ -1.75
MDM2-227ENST00000540709 SLC39A10Q9ULF5 831 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 SLC12A4Q9UP95 1085 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 TNFSF13BQ9Y275 285 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 LRP12Q9Y561 859 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 INSL5Q9Y5Q6 135 aa4.11□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3DA0A087WVF3 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3IA0A087WXS9 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3EA0A087X179 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3KA0A087X1G2 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 RPS10-NUDT3A0A1W2PQS6 291 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3BA6NDS4 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3FA6NER0 549 aaPredicted RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 KIF28PB7ZC32 967 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3LB9A6J9 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TNFRSF13BO14836 293 aaPredicted RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 PCDH17O14917 1159 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 NKX2-8O15522 239 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 ATG13O75143 517 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 SGPL1O95470 568 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 NTSR2O95665 410 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 ANXA6P08133 673 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3HP0C7X1 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 ABCB4P21439 1286 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBXAS1P24557 533 aaPredicted RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 HOXA11P31270 313 aaPredicted RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 GRK5P34947 590 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 KCNJ4P48050 445 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 AK2P54819 239 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TAS2R50P59544 299 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 PMPCAQ10713 525 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 C10orf76Q5T2E6 689 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 ARL6IP4Q66PJ3 421 aaKnown RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3GQ6DHY5 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3CQ6IPX1 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 C11orf96Q7Z7L8 435 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 TBC1D3Q8IZP1 549 aaPredicted RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 ADPRHL1Q8NDY3 354 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 WDR60Q8WVS4 1066 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 IP6K1Q92551 441 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 KAT2AQ92830 837 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 MYD88Q99836 296 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 WDR83Q9BRX9 315 aaKnown RBP4.1□□□□□ -1.75
MDM2-227ENST00000540709 NECTIN3Q9NQS3 549 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 FNIP2Q9P278 1114 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 CA14Q9ULX7 337 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 PHTF1Q9UMS5 762 aa4.1□□□□□ -1.75
MDM2-227ENST00000540709 DHHO43323 396 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 MSI1O43347 362 aaKnown RBP4.09□□□□□ -1.75
MDM2-227ENST00000540709 DNPH1O43598 174 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 CAND2O75155 1236 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 RPP40O75818 363 aaKnown RBP4.09□□□□□ -1.75
MDM2-227ENST00000540709 WNT1P04628 370 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 HOXB2P14652 356 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 GNALP38405 381 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 KIAA1755Q5JYT7 1200 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 DGKKQ5KSL6 1271 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 WASHC2DQ5SRD0 308 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 UBAP2Q5T6F2 1119 aaKnown RBP4.09□□□□□ -1.75
MDM2-227ENST00000540709 CCDC181Q5TID7 509 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 SRLQ86TD4 932 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 SYTL1Q8IYJ3 562 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 ADGRF3Q8IZF5 1079 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 FBXL14Q8N1E6 418 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 OR52N4Q8NGI2 321 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 NTPCRQ9BSD7 190 aaKnown RBP4.09□□□□□ -1.75
MDM2-227ENST00000540709 TMEM204Q9BSN7 226 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 SF3B5Q9BWJ5 86 aaKnown RBP4.09□□□□□ -1.75
MDM2-227ENST00000540709 MYLK2Q9H1R3 596 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 TM7SF3Q9NS93 570 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 IGSF9Q9P2J2 1179 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 PROCRQ9UNN8 238 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 LMTK3Q96Q04 1460 aa4.09□□□□□ -1.75
MDM2-227ENST00000540709 ANO9A1A5B4 782 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 GTPBP1O00178 669 aaKnown RBP4.08□□□□□ -1.76
MDM2-227ENST00000540709 PLA2G6O60733 806 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 GLP2RO95838 553 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 NGFRP08138 427 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 TGFB3P10600 412 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 PGGT1BP53609 377 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 RPL15P61313 204 aaKnown RBP4.08□□□□□ -1.76
MDM2-227ENST00000540709 ALG10Q5BKT4 473 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 ALG10BQ5I7T1 473 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 TTC39AQ5SRH9 613 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 Q6ZTK2 550 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 CTU1Q7Z7A3 348 aaKnown RBP4.08□□□□□ -1.76
MDM2-227ENST00000540709 TRABD2AQ86V40 505 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 B4GALNT2Q8NHY0 566 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 PAAF1Q9BRP4 392 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 MECRQ9BV79 373 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 SORBS1Q9BX66 1292 aaKnown RBP4.08□□□□□ -1.76
MDM2-227ENST00000540709 ISCUQ9H1K1 167 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 TASP1Q9H6P5 420 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 KCNK9Q9NPC2 374 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms