RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CNPY1Q3B7I2 92 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 GRTP1Q5TC63 336 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 ARHGAP17Q68EM7 881 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 DEFB107AQ8IZN7 70 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 ST13P4Q8IZP2 240 aaPredicted RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 GDPD5Q8WTR4 605 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 NCSTNQ92542 709 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 PRDM16Q9HAZ2 1276 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 TXNDC16Q9P2K2 825 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 RTN3O95197 1032 aaPredicted RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 SLC25A27O95847 323 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 INSRRP14616 1297 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 VCLP18206 1134 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 GP5P40197 560 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 ITGA9Q13797 1035 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 LRRC36Q1X8D7 754 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 SOWAHAQ2M3V2 549 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 FSCBQ5H9T9 825 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 CFAP157Q5JU67 520 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 LINC01465Q8N7H1 131 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 CPNE1Q99829 537 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 CYP4F11Q9HBI6 524 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 PIH1D1Q9NWS0 290 aaKnown RBP12.61□□□□□ -0.39
NPC1-202ENST00000540608 PCDHB12Q9Y5F1 795 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 CDY1Q9Y6F8 540 aa12.61□□□□□ -0.39
NPC1-202ENST00000540608 TRIP11Q15643 1979 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 LOC100653049A0A140TA62 436 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 RNF103O00237 685 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 ADCY6O43306 1168 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 PEX1O43933 1283 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 KRT34O76011 436 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 POLBP06746 335 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 ERVK-10P10266 1014 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 CYP2C8P10632 490 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 ARL4AP40617 200 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 GRM2Q14416 872 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 KCTD2Q14681 263 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 SPANXN3Q5MJ09 141 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 MAP3K21Q5TCX8 1036 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 EPGNQ6UW88 154 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 FRMD7Q6ZUT3 714 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 HPS6Q86YV9 775 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 PHTF2Q8N3S3 785 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 NLGN2Q8NFZ4 835 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 ISL2Q96A47 359 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 P2RY11Q96G91 374 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 SHCBP1LQ9BZQ2 653 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 DMAP1Q9NPF5 467 aaPredicted RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 SYBUQ9NX95 663 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 RCOR3Q9P2K3 495 aaPredicted RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 SF3B1O75533 1304 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■■ 146.6
NPC1-202ENST00000540608 CASQ2O14958 399 aaPredicted RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 AP1G2O75843 785 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 VTNP04004 478 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 COX4I1P13073 169 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 ACAT1P24752 427 aaKnown RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 MAGEA12P43365 314 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 RPL34P49207 117 aaKnown RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 GLUD2P49448 558 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 AQP4P55087 323 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 MTTPP55157 894 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 TBL3Q12788 808 aaKnown RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 DYNC1I2Q13409 638 aaKnown RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 CUL3Q13618 768 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 METTL21CQ5VZV1 264 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 STRADAQ7RTN6 431 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 KBTBD6Q86V97 674 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 UNC93AQ86WB7 457 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 CCDC124Q96CT7 223 aaKnown RBP12.6□□□□□ -0.39
NPC1-202ENST00000540608 CERS2Q96G23 380 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 RTKNQ9BST9 563 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 CDH19Q9H159 772 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 SNX15Q9NRS6 342 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 ADAM28Q9UKQ2 775 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 FZD10Q9ULW2 581 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
NPC1-202ENST00000540608 DCXO43602 365 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 TSPAN1O60635 241 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 CCDC130P13994 396 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 RAG1P15918 1043 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 PEX2P28328 305 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 SERPINB6P35237 376 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 MLH1P40692 756 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 BSPRYQ5W0U4 402 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 ANKRD52Q8NB46 1076 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 FERMT1Q9BQL6 677 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 ZNF358Q9NW07 568 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 ETAA1Q9NY74 926 aa12.59□□□□□ -0.39
NPC1-202ENST00000540608 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■□□□□ 8.4
NPC1-202ENST00000540608 H3BNX3 289 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms