RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 SRPRAP08240 638 aaKnown RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 CSKP41240 450 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 MATKP42679 507 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 AFF3P51826 1226 aaKnown RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 PDCLQ13371 301 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 TRIP6Q15654 476 aaKnown RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 EXOC3L4Q17RC7 722 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 HNRNPA1L2Q32P51 320 aaKnown RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 DCAF6Q58WW2 860 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 USP30Q70CQ3 517 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 NAXDQ8IW45 347 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 ADAM32Q8TC27 787 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 MYO19Q96H55 970 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 CRACR2AQ9BSW2 395 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 RSPH9Q9H1X1 276 aaPredicted RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 C6orf106Q9H6K1 298 aaPredicted RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 KIAA1522Q9P206 1035 aaPredicted RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 TJP2Q9UDY2 1190 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 SLC12A6Q9UHW9 1150 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 CYTH4Q9UIA0 394 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 INTS6Q9UL03 887 aaKnown RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 NCKAP1Q9Y2A7 1128 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.31■□□□□ 0.36
PSMD3-204ENST00000540504 MSRB2Q9Y3D2 182 aa17.31■□□□□ 0.36
PSMD3-204ENST00000540504 TARSL2A2RTX5 802 aaKnown RBP17.3■□□□□ 0.36
PSMD3-204ENST00000540504 BECN2A8MW95 431 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 HYAL3O43820 417 aaPredicted RBP17.3■□□□□ 0.36
PSMD3-204ENST00000540504 SLC2A3P11169 496 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 SLC9A1P19634 815 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 MTA1Q13330 715 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 EIF4EBP2Q13542 120 aaPredicted RBP17.3■□□□□ 0.36
PSMD3-204ENST00000540504 SLC12A1Q13621 1099 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 TEAD4Q15561 434 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 CREBRFQ8IUR6 639 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 LGI2Q8N0V4 545 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 MLKLQ8NB16 471 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 SHC3Q92529 594 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 GATA6Q92908 595 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 MYEOVQ96EZ4 313 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 MRGPRX3Q96LB0 322 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 GAREM1Q9H706 876 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 ASNSD1Q9NWL6 643 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 PCDHGC3Q9UN70 934 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 PCDHGB2Q9Y5G2 931 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 USP24Q9UPU5 2620 aa17.3■□□□□ 0.36
PSMD3-204ENST00000540504 ITIH6Q6UXX5 1313 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 FAM221BA6H8Z2 402 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 TACR2P21452 398 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 USP8P40818 1118 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 SNX16P57768 344 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 FAM193AP78312 1265 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 CDK17Q00537 523 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 PTK2Q05397 1052 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 CAMK4Q16566 473 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 ARHGAP44Q17R89 818 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 ZC3H12AQ5D1E8 599 aaKnown RBP17.29■□□□□ 0.36
PSMD3-204ENST00000540504 FSCBQ5H9T9 825 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 PITRM1Q5JRX3 1037 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 EFHC1Q5JVL4 640 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
PSMD3-204ENST00000540504 GLRX5Q86SX6 157 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 CHSY1Q86X52 802 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 CFAP52Q8N1V2 620 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 SNX19Q92543 992 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 CAMK1GQ96NX5 476 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 NOX5Q96PH1 765 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 PABPC3Q9H361 631 aaKnown RBP17.29■□□□□ 0.36
PSMD3-204ENST00000540504 ACP6Q9NPH0 428 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 TM7SF3Q9NS93 570 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 ERVW-1Q9UQF0 538 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 FRYQ5TBA9 3013 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 NUMA1Q14980 2115 aa17.29■□□□□ 0.36
PSMD3-204ENST00000540504 KCNU1A8MYU2 1149 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 F5H5T6 163 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 HSF2BPO75031 334 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 SIN3BO75182 1162 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 PRKCSHP14314 528 aaPredicted RBP17.28■□□□□ 0.36
PSMD3-204ENST00000540504 ABCB4P21439 1286 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 CD27P26842 260 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 PON1P27169 355 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 CCR1P32246 355 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 GRIA4P48058 902 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 OXCT1P55809 520 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 ECT2LQ008S8 904 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 BNC1Q01954 994 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 HLA-BQ31612 363 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 RNF219Q5W0B1 726 aaPredicted RBP17.28■□□□□ 0.36
PSMD3-204ENST00000540504 RAP1GAP2Q684P5 730 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 GJB7Q6PEY0 223 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 DBX2Q6ZNG2 339 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 RAB44Q7Z6P3 723 aaPredicted RBP17.28■□□□□ 0.36
PSMD3-204ENST00000540504 IRF2BP1Q8IU81 584 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 WDTC1Q8N5D0 677 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 BIRC7Q96CA5 298 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 PPP1R13BQ96KQ4 1090 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 SLC2A13Q96QE2 648 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
PSMD3-204ENST00000540504 XPO7Q9UIA9 1087 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms