RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 DNAJC3Q13217 504 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 STARD3Q14849 445 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 KIAA1614Q5VZ46 1190 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 LYPD8Q6UX82 237 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 CLEC18BQ6UXF7 455 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 C11orf57Q6ZUT1 292 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 PAQR9Q6ZVX9 377 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 CRYBG2Q8N1P7 616 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 NAT16Q8N8M0 369 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 EXD3Q8N9H8 876 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 CLEC18CQ8NCF0 446 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 CEP295NLQ96MC4 621 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 TWNKQ96RR1 684 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 SYT15Q9BQS2 421 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 SNX25Q9H3E2 840 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 SAMSN1Q9NSI8 373 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 TRPM5Q9NZQ8 1165 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 A0A1B0GTQ1 180 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 KCNJ18B7U540 433 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 OLFM2O95897 454 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 NDST1P52848 882 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 E2F1Q01094 437 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 KLHL40Q2TBA0 621 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 CFAP221Q4G0U5 840 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 HSP90AA4PQ58FG1 418 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 GRAMD4Q6IC98 578 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 SASS6Q6UVJ0 657 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 ACOT1Q86TX2 421 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 CREBRFQ8IUR6 639 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 EHBP1Q8NDI1 1231 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 MYCBPAPQ8TBZ2 947 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 ENOX1Q8TC92 643 aaKnown RBP9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 CCDC97Q96F63 343 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 LIN37Q96GY3 246 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 PCED1BQ96HM7 432 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 SEMA3CQ99985 751 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 RNF38Q9H0F5 515 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 THAP9Q9H5L6 903 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 CYP3A43Q9HB55 503 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 TM9SF3Q9HD45 589 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 TMEM30AQ9NV96 361 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 EHD2Q9NZN4 543 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 CFAP97Q9P2B7 532 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 HMGXB4Q9UGU5 601 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 ADAMTS1Q9UHI8 967 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 MAN2B2Q9Y2E5 1009 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 RAD54BQ9Y620 910 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 CPQQ9Y646 472 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 OBSL1O75147 1896 aa9.28□□□□□ -0.92
TRAPPC1-202ENST00000540486 BOD1L1Q8NFC6 3051 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 CLDN5O00501 218 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 NPC1O15118 1278 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 P4HA2O15460 535 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 YKT6O15498 198 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 ITGAVP06756 1048 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 ACADMP11310 421 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 P4HA1P13674 534 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 BDNFP23560 247 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 LSSP48449 732 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 INCA1Q0VD86 236 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 LRMPQ12912 555 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 NCAPHQ15003 741 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 FUT11Q495W5 492 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 MDH1BQ5I0G3 518 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 CCDC81Q6ZN84 652 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 UNC93AQ86WB7 457 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 TMPRSS6Q8IU80 811 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 SPATA2LQ8IUW3 424 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 C12orf29Q8N999 325 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 SNX19Q92543 992 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 MYLPFQ96A32 169 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 SIPA1Q96FS4 1042 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 FUBP3Q96I24 572 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 FAXDC2Q96IV6 333 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 SPATA17Q96L03 361 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 XPO6Q96QU8 1125 aaKnown RBP9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 FUCA2Q9BTY2 467 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 ELOVL4Q9GZR5 314 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 NIF3L1Q9GZT8 377 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 MKRN2Q9H000 416 aaKnown RBP9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 SPHK2Q9NRA0 654 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 THSD1Q9NS62 852 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 ANO10Q9NW15 660 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 FANCLQ9NW38 375 aa9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 MAGEC2Q9UBF1 373 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC1-202ENST00000540486 ZNF840PA6NDX5 716 aa9.26□□□□□ -0.93
TRAPPC1-202ENST00000540486 RNF225M0QZC1 329 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC1-202ENST00000540486 CBX4O00257 560 aa9.26□□□□□ -0.93
TRAPPC1-202ENST00000540486 BEST1O76090 585 aa9.26□□□□□ -0.93
TRAPPC1-202ENST00000540486 MT-CO3P00414 261 aa9.26□□□□□ -0.93
TRAPPC1-202ENST00000540486 CCNYL3P0C7X3 344 aa9.26□□□□□ -0.93
TRAPPC1-202ENST00000540486 CKMT2P17540 419 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms