RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 DCXO43602 365 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ALADP13716 330 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 AMPD1P23109 780 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 EPHB2P29323 1055 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 HOXC13P31276 330 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CETN2P41208 172 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 IRAK1P51617 712 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ZNF135P52742 658 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 VCPP55072 806 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DPYSQ14117 519 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PARM1Q6UWI2 310 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 LRRC31Q6UY01 552 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PQLC3Q8N755 202 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 BPIFB1Q8TDL5 484 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TBC1D31Q96DN5 1066 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CAPZA3Q96KX2 299 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PRICKLE1Q96MT3 831 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 LINC00597Q9H2U6 94 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RRAGDQ9NQL2 400 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ARHGEF4Q9NR80 690 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MUTYHQ9UIF7 546 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TCRBV7S2A1N4TA0A589 114 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DRGXA6NNA5 263 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 GFRA2O00451 464 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TSPAN3O60637 253 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 FGGP02679 453 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 SGSHP51688 502 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RWDD4Q6NW29 188 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 SLC13A5Q86YT5 568 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RFX6Q8HWS3 928 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CPXM2Q8N436 756 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 FGF14Q92915 247 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RPRD1AQ96P16 312 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DDX50Q9BQ39 737 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MPP6Q9NZW5 540 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 EPS15L1Q9UBC2 864 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CDC23Q9UJX2 597 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 EFR3BQ9Y2G0 817 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 WNT6Q9Y6F9 365 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DAPK3O43293 454 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ERCC2P18074 760 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 HTR7P34969 479 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 C5orf22Q49AR2 442 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ALFQ53S48 1182 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 VITQ6UXI7 678 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 P2RY11Q96G91 374 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RPP25Q9BUL9 199 aaKnown RBP19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PLA2G2FQ9BZM2 168 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ETNK2Q9NVF9 386 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TBC1D14Q9P2M4 693 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PPARGC1AQ9UBK2 798 aaKnown RBP19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TTC7AQ9ULT0 858 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MFHAS1Q9Y4C4 1052 aa19.5■□□□□ 0.71
TNFRSF1A-213ENST00000540022 FAM86C2PA6NEL3 165 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PDE2AO00408 941 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DCLK1O15075 740 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CST8O60676 142 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 GPR37L1O60883 481 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CNTN5O94779 1100 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CHKAP35790 457 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RPS24P62847 133 aaKnown RBP19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DYNLT1P63172 113 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 KLF1Q13351 362 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 SLC9A4Q6AI14 798 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ADAT2Q7Z6V5 191 aaKnown RBP19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CIR1Q86X95 450 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ZDHHC14Q8IZN3 488 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CFAP52Q8N1V2 620 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 KIAA1958Q8N8K9 716 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TDRD5Q8NAT2 981 aaKnown RBP19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ACTRT1Q8TDG2 376 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RSAD2Q8WXG1 361 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 E2F7Q96AV8 911 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 KXD1Q9BQD3 176 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 LRFN3Q9BTN0 628 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MAK16Q9BXY0 300 aaKnown RBP19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ZYG11BQ9C0D3 744 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 STIM2Q9P246 746 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MRFAP1Q9Y605 127 aa19.49■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PGRMC1O00264 195 aaKnown RBP19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 LONRF2Q1L5Z9 754 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TMEM31Q5JXX7 168 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TPGS1Q6ZTW0 290 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 BBS12Q6ZW61 710 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NLRP14Q86W24 1093 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ADGRG2Q8IZP9 1017 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PLD5Q8N7P1 536 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 OSCP1Q8WVF1 389 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ELSPBP1Q96BH3 223 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 OTUB2Q96DC9 234 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TMA16Q96EY4 203 aaKnown RBP19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ASIC4Q96FT7 647 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 LIMD1Q9UGP4 676 aa19.48■□□□□ 0.71
TNFRSF1A-213ENST00000540022 SLC9A3R1O14745 358 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 APOL1O14791 398 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 FGF10O15520 208 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TJP3O95049 919 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RHOQP17081 205 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TFDP2Q14188 446 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms