RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 ZNF252P-AS1Q0IIN9 211 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NME3Q13232 169 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PTPN20Q4JDL3 420 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PITRM1Q5JRX3 1037 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 HDDC3Q8N4P3 179 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ZCCHC9Q8N567 271 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MINDY1Q8N5J2 469 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 LMLNQ96KR4 655 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SLC2A13Q96QE2 648 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SUSD2Q9UGT4 822 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SUN2Q9UH99 717 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 INTS6Q9UL03 887 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NFE2L3Q9Y4A8 694 aa13.19□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CKAP5Q14008 2032 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 LAMA1P25391 3075 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 KCNU1A8MYU2 1149 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ARHGAP33O14559 1287 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 OPHN1O60890 802 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 DAB1O75553 588 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MOCS3O95396 460 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ASLP04424 464 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GLI1P08151 1106 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SYPP08247 313 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CCR1P32246 355 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GGCXP38435 758 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SNX16P57768 344 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 BPIFB4P59827 614 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 RPS14P62263 151 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TCP11X2Q5H9J9 407 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 KLHDC7AQ5VTJ3 777 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 OLFML1Q6UWY5 402 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 DHX40Q8IX18 779 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 APCDD1Q8J025 514 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GANCQ8TET4 914 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 VPS16Q9H269 839 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ASNSD1Q9NWL6 643 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 EIF2B4Q9UI10 523 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ANGPTL2Q9UKU9 493 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ERVW-1Q9UQF0 538 aa13.18□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SPTBN2O15020 2390 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 METTL12A8MUP2 240 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TTC34A8MYJ7 566 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 M0QYT0 321 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SIN3BO75182 1162 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 IGLV3-19P01714 112 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SLC2A3P11169 496 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CYP11B1P15538 503 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CSRP1P21291 193 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PMLP29590 882 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ACSL1P33121 698 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SLC6A3Q01959 620 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CENPCQ03188 943 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FOXC1Q12948 553 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TTC31Q49AM3 519 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ZNF776Q68DI1 518 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 DPY19L2P1Q6NXN4 242 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TMEM35BQ8NCS4 154 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CADM4Q8NFZ8 388 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GPT2Q8TD30 523 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TTC17Q96AE7 1141 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MYO19Q96H55 970 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 RPRD1AQ96P16 312 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GBP4Q96PP9 640 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SLC32A1Q9H598 525 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 C6orf106Q9H6K1 298 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FBRSQ9HAH7 460 aa13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 KIAA1522Q9P206 1035 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 A0A1B0GTW7 788 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FAM47DPA6NHR8 397 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CEACAM1P13688 526 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 UCHL3P15374 230 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MZF1P28698 734 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 STK19P49842 368 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 KLK7P49862 253 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SULT1E1P49888 294 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 IRAK1P51617 712 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ECT2LQ008S8 904 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GRIK2Q13002 908 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 EIF4EBP2Q13542 120 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 HNRNPA1L2Q32P51 320 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 C2CD6Q53TS8 623 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CLEC17AQ6ZS10 378 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SLC26A9Q7LBE3 791 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 DNASE2BQ8WZ79 361 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MRGPRX3Q96LB0 322 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PRMT1Q99873 361 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 BTBD1Q9H0C5 482 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SIK2Q9H0K1 926 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms