RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 HSPA9P38646 679 aaKnown RBP12.13□□□□□ -0.47
VTN-202ENST00000539746 GUCY2DQ02846 1103 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 AUHQ13825 339 aaKnown RBP12.13□□□□□ -0.47
VTN-202ENST00000539746 HLTFQ14527 1009 aaKnown RBP eCLIP12.13□□□□□ -0.47
VTN-202ENST00000539746 C5orf22Q49AR2 442 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 MS4A13Q5J8X5 152 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 SPDYCQ5MJ68 293 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 OTUD1Q5VV17 481 aaPredicted RBP12.13□□□□□ -0.47
VTN-202ENST00000539746 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 ARHGEF18Q6ZSZ5 1173 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 CYP4V2Q6ZWL3 525 aaPredicted RBP12.13□□□□□ -0.47
VTN-202ENST00000539746 TMC8Q8IU68 726 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 UMODL1-AS1Q8N2C9 162 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 CCNYQ8ND76 341 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 PCDH19Q8TAB3 1148 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 HDAC11Q96DB2 347 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 RTP4Q96DX8 246 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 QKIQ96PU8 341 aaKnown RBP eCLIP12.13□□□□□ -0.47
VTN-202ENST00000539746 KLF16Q9BXK1 252 aaPredicted RBP12.13□□□□□ -0.47
VTN-202ENST00000539746 RAB21Q9UL25 225 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 CPQQ9Y646 472 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 HS3ST4Q9Y661 456 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 PTPRSQ13332 1948 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 A0A1W2PRU2 124 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 ILVBLA1L0T0 632 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 DRGXA6NNA5 263 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 E7EVH7 732 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 DCLK1O15075 740 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 MSI1O43347 362 aaKnown RBP12.12□□□□□ -0.47
VTN-202ENST00000539746 ATP8B1O43520 1251 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 STC2O76061 302 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 RHOXF2BP0C7M4 288 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 EPCAMP16422 314 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 OR1E1P30953 314 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 PBX2P40425 430 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 GALNT2Q10471 571 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 LAMB3Q13751 1172 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 DMC1Q14565 340 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 MORF4L2Q15014 288 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 ERCC6LQ2NKX8 1250 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 ATP13A4Q4VNC1 1196 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 MANEALQ5VSG8 457 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 ADAT2Q7Z6V5 191 aaKnown RBP12.12□□□□□ -0.47
VTN-202ENST00000539746 GPR149Q86SP6 731 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 GABPB2Q8TAK5 448 aaPredicted RBP12.12□□□□□ -0.47
VTN-202ENST00000539746 GDPD5Q8WTR4 605 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 C1orf54Q8WWF1 131 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 HTR3CQ8WXA8 447 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 TMA16Q96EY4 203 aaKnown RBP12.12□□□□□ -0.47
VTN-202ENST00000539746 TSGA13Q96PP4 275 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 RHOXF2Q9BQY4 288 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 SLC2A11Q9BYW1 496 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 IL21Q9HBE4 155 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 MTMR10Q9NXD2 777 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 SHOC2Q9UQ13 582 aa12.12□□□□□ -0.47
VTN-202ENST00000539746 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 C5orf60A6NFR6 353 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 GCATO75600 419 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 NFATC1O95644 943 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 ADH1CP00326 375 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 IFNB1P01574 187 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 KRT14P02533 472 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 HMBSP08397 361 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 TCF4P15884 667 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 TFE3P19532 575 aaPredicted RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 NFKBIAP25963 317 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 IRS1P35568 1242 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 MAPK8P45983 427 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 SULT2A1Q06520 285 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 SLC20A2Q08357 652 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 PPIDQ08752 370 aaKnown RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 AP1B1Q10567 949 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 ILF2Q12905 390 aaKnown RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 CDH18Q13634 790 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 CAMK1Q14012 370 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 PDGFRLQ15198 375 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 OASLQ15646 514 aaKnown RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 CFAP58Q5T655 872 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 DAB2IPQ5VWQ8 1189 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 NCBP2-AS2Q69YL0 99 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 TXNRD3NBQ6F5E7 133 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 RETSATQ6NUM9 610 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 C1orf228Q6PIY5 440 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 RBM23Q86U06 439 aaKnown RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 DENND1CQ8IV53 801 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 CCDC13Q8IYE1 715 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 LGI2Q8N0V4 545 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 ATP2A3Q93084 1043 aa12.11□□□□□ -0.47
VTN-202ENST00000539746 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
VTN-202ENST00000539746 LRRC1Q9BTT6 524 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms