RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 NME8Q8N427 588 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 ISL2Q96A47 359 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 CPB2Q96IY4 423 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 SPATA33Q96N06 139 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 MPHOSPH6Q99547 160 aaKnown RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 CPNE1Q99829 537 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 MRPL45Q9BRJ2 306 aaKnown RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 CDH19Q9H159 772 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 EPB41L1Q9H4G0 881 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 LOC100653049A0A140TA62 436 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 TMEM114B3SHH9 223 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ADCY6O43306 1168 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 KRT34O76011 436 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 STK10O94804 968 aaKnown RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 POLBP06746 335 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 CYP2C8P10632 490 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 RAG1P15918 1043 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ARF4P18085 180 aaPredicted RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 SERPINB6P35237 376 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 CHN2P52757 468 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ATXN1P54253 815 aaKnown RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 DLG1Q12959 904 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 LSAMPQ13449 338 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 PDK3Q15120 406 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 TRIP10Q15642 601 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 MMEL1Q495T6 779 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ANKRD20A4Q4UJ75 823 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ZNF484Q5JVG2 852 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 SPANXN3Q5MJ09 141 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 OGFRL1Q5TC84 451 aaPredicted RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 ARHGAP17Q68EM7 881 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 UGT2A3Q6UWM9 527 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 APOBEC3FQ8IUX4 373 aaKnown RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 DTNBP1Q96EV8 351 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 SHCBP1LQ9BZQ2 653 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 SPATC1LQ9H0A9 340 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 COG4Q9H9E3 785 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 CYP4F11Q9HBI6 524 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 TXNDC16Q9P2K2 825 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 RCOR3Q9P2K3 495 aaPredicted RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 A0A087WZ62 844 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 SMIM31A0A1B0GVY4 71 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 DENRO43583 198 aaKnown RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 DCXO43602 365 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ZBTB14O43829 449 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ZBTB7AO95365 584 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 GOT1P17174 413 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ARL4AP40617 200 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 RPL34P49207 117 aaKnown RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 GLUD2P49448 558 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 SH3BGRP55822 239 aaPredicted RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 SLC5A9Q2M3M2 681 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 TREML2Q5T2D2 321 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 CCDC185Q8N715 623 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 ICA1LQ8NDH6 482 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 CCDC124Q96CT7 223 aaKnown RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 CERS2Q96G23 380 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 LGMNQ99538 433 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 FDXACB1Q9BRP7 624 aaPredicted RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 SNX15Q9NRS6 342 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 FAM49BQ9NUQ9 324 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 SYBUQ9NX95 663 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 C6orf203Q9P0P8 240 aaPredicted RBP9.91□□□□□ -0.82
CDH13-204ENST00000539548 PSMD13Q9UNM6 376 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 MFHAS1Q9Y4C4 1052 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 NR2E3Q9Y5X4 410 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 PLXNA1Q9UIW2 1896 aa9.91□□□□□ -0.82
CDH13-204ENST00000539548 SCN1AP35498 2009 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 G3V2L1 256 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 RNF103O00237 685 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 H2AFYO75367 372 aaKnown RBP9.9□□□□□ -0.82
CDH13-204ENST00000539548 HSPA4LO95757 839 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 MPOP05164 745 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 ERVK-10P10266 1014 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 GLDCP23378 1020 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 SPRP35270 261 aaPredicted RBP9.9□□□□□ -0.82
CDH13-204ENST00000539548 GRIA2P42262 883 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 ALDH1A3P47895 512 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 SERPINB8P50452 374 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 CLCN2P51788 898 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 FOLH1Q04609 750 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 FRG1Q14331 258 aaKnown RBP9.9□□□□□ -0.82
CDH13-204ENST00000539548 PDCD2Q16342 344 aaPredicted RBP9.9□□□□□ -0.82
CDH13-204ENST00000539548 SOWAHAQ2M3V2 549 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 TCHHL1Q5QJ38 904 aaPredicted RBP9.9□□□□□ -0.82
CDH13-204ENST00000539548 STRADAQ7RTN6 431 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 UNC93AQ86WB7 457 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 PSTKQ8IV42 348 aaKnown RBP9.9□□□□□ -0.82
CDH13-204ENST00000539548 DCLK2Q8N568 766 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 LINC01465Q8N7H1 131 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 CLEC4CQ8WTT0 213 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 NAT14Q8WUY8 206 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 P2RY11Q96G91 374 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 RBBP8Q99708 897 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 FERMT1Q9BQL6 677 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 RNPEPQ9H4A4 650 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 ZNF358Q9NW07 568 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 PIM2Q9P1W9 311 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 STK39Q9UEW8 545 aa9.9□□□□□ -0.82
CDH13-204ENST00000539548 PRPF19Q9UMS4 504 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms