RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CLEC18CQ8NCF0 446 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SRFBP1Q8NEF9 429 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SHCBP1Q8NEM2 672 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SOCS4Q8WXH5 440 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SNAPC3Q92966 411 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SKA1Q96BD8 255 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 KIF1BPQ96EK5 621 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SAAL1Q96ER3 474 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 HES6Q96HZ4 224 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PAGR1Q9BTK6 254 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 HEMGNQ9BXL5 484 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TEX12Q9BXU0 123 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 INO80BQ9C086 356 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 AMBRA1Q9C0C7 1298 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SYNCQ9H7C4 482 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ERVMER34-1Q9H9K5 563 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PLEKHA2Q9HB19 425 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TAS2R10Q9NYW0 307 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 DNAJB11Q9UBS4 358 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FBXO9Q9UK97 447 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 HPSEQ9Y251 543 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 NR2E1Q9Y466 385 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PCDHB2Q9Y5E7 798 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ASTN2O75129 1339 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 LOC105369274A0A096LPK9 316 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 LOC102723532A0A0G2JNH3 316 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 A0A1W2PRX2 142 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TEX22C9J3V5 150 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MUSKO15146 869 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 KRT38O76015 456 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PDE8BO95263 885 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MLYCDO95822 493 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FESP07332 822 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ACP5P13686 325 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CR2P20023 1033 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SFPQP23246 707 aaKnown RBP eCLIP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ANOS1P23352 680 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 AKT1P31749 480 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ACSL1P33121 698 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MCM5P33992 734 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 THBS4P35443 961 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MSX2P35548 267 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 GJC1P36383 396 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PNPLA4P41247 253 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 KCNJ5P48544 419 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CTCFP49711 727 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SCNN1GP51170 649 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FOXL2P58012 376 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 POU5F1Q01860 360 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TRPC3Q13507 836 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PRPF4BQ13523 1007 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ICAM4Q14773 271 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SPDYE7PQ495Y7 208 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TTC31Q49AM3 519 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SH2D4BQ5SQS7 431 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 C1QTNF12Q5T7M4 302 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FAM205BPQ63HN1 556 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SLC9A4Q6AI14 798 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 DGAT2L7PQ6IED9 249 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TAPT1Q6NXT6 567 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MSANTD1Q6ZTZ1 278 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC186Q7Z3E2 898 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TAX1BP1Q86VP1 789 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 OR4N4Q8N0Y3 316 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CCAR2Q8N163 923 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 EXD3Q8N9H8 876 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TSPAN14Q8NG11 270 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 OR56A1Q8NGH5 318 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 BPIFB1Q8TDL5 484 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 NPIPB3Q92617 1050 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 ELP4Q96EB1 424 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 C20orf173Q96LM9 149 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 REEP2Q9BRK0 252 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 FSD1LQ9BXM9 530 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MLXIPLQ9NP71 852 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RIC8AQ9NPQ8 531 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PLSCR4Q9NRQ2 329 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 SPATS2LQ9NUQ6 558 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 INTS13Q9NVM9 706 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 C2orf42Q9NWW7 574 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CNPY2Q9Y2B0 182 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 CACNA1IQ9P0X4 2223 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 A0A0G2JLL6 359 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 OTOL1A6NHN0 477 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 AGAP5A6NIR3 686 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 A6NLC8 198 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 NPIPB6E9PJ23 425 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 H0Y3Z8 333 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 EPB41L2O43491 1005 aaKnown RBP1.16□□□□□ -2.22
HIF1A-204ENST00000539097 KLKB1P03952 638 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 TUBBP07437 444 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 COX7A2P14406 83 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 MYF6P23409 242 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 NDST2P52849 883 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 RAC3P60763 192 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 DCAF7P61962 342 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 NHLH2Q02577 135 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 GALNT2Q10471 571 aa1.16□□□□□ -2.22
HIF1A-204ENST00000539097 PRKG1Q13976 671 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms