RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 SLC39A3Q9BRY0 314 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 MROQ9BYG7 248 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 SMARCAD1Q9H4L7 1026 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 ENAMQ9NRM1 1142 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 DUS2Q9NX74 493 aaKnown RBP10.96□□□□□ -0.66
RTN3-208ENST00000537981 TXNDC16Q9P2K2 825 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 SQORQ9Y6N5 450 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 E2F8A0AVK6 867 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 KBTBD13C9JR72 458 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 GLULP15104 373 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 SLC16A2P36021 539 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 ELK3P41970 407 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 DYNLT1P63172 113 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 MORF4L2Q15014 288 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 LYPD8Q6UX82 237 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 ATP6V0D2Q8N8Y2 350 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 SLC4A11Q8NBS3 891 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 SUN5Q8TC36 379 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 TRUB1Q8WWH5 349 aaKnown RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 TP53INP1Q96A56 240 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 ALKBH8Q96BT7 664 aaKnown RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 ZNF597Q96LX8 424 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 CLSTN3Q9BQT9 956 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 HOXD1Q9GZZ0 328 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 PLEKHA5Q9HAU0 1116 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 WDR6Q9NNW5 1121 aaKnown RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 GPRC5CQ9NQ84 441 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 SMYD2Q9NRG4 433 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 DNAJC28Q9NX36 388 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 STK39Q9UEW8 545 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 GJA3Q9Y6H8 435 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 SOCS2O14508 198 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 AURKAO14965 403 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 TBX3O15119 743 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 RFPL1O75677 317 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 FARP2O94887 1054 aaPredicted RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 APBA3O96018 575 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 COL6A1P12109 1028 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 CYP11B1P15538 503 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 TRIM28Q13263 835 aaKnown RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 TBCCQ15814 346 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 C1orf220Q5T0J3 134 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 ATAD3BQ5T9A4 648 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 CTAGE3PQ8IX95 158 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 CHPFQ8IZ52 775 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 OFCC1Q8IZS5 231 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 PGBD3Q8N328 593 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 CCDC24Q8N4L8 307 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 PPM1NQ8N819 430 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 ZNF641Q96N77 438 aaPredicted RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 PSD2Q9BQI7 771 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 SOX17Q9H6I2 414 aaPredicted RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 NOL6Q9H6R4 1146 aaKnown RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 POLR1BQ9H9Y6 1135 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 ARNT2Q9HBZ2 717 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 PNPLA3Q9NST1 481 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 APOBEC2Q9Y235 224 aaKnown RBP10.95□□□□□ -0.66
RTN3-208ENST00000537981 PCDHB2Q9Y5E7 798 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 NFASCO94856 1347 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 CDK5RAP2Q96SN8 1893 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 PTPRFP10586 1907 aa10.95□□□□□ -0.66
RTN3-208ENST00000537981 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 CCRL2O00421 344 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 HOXC11O43248 304 aaPredicted RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 B4GAT1O43505 415 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 IL18RAPO95256 599 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 FYNP06241 537 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 INHBAP08476 426 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ENPP1P22413 925 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 DCKP27707 260 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ADCY7P51828 1080 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 CHRNDQ07001 517 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 BFSP1Q12934 665 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 EML3Q32P44 896 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 TEDDM1Q5T9Z0 273 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 SCARA3Q6AZY7 606 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 TAS2R42Q7RTR8 314 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 KIAA2013Q8IYS2 634 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 SPERTQ8NA61 448 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 MAPK15Q8TD08 544 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 CALML6Q8TD86 181 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ADAMTS16Q8TE57 1224 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 SLC44A1Q8WWI5 657 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 SEMA4DQ92854 862 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 NSUN4Q96CB9 384 aaKnown RBP10.94□□□□□ -0.66
RTN3-208ENST00000537981 PGBD4Q96DM1 585 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 DOK1Q99704 481 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 ZNF341Q9BYN7 854 aa10.94□□□□□ -0.66
RTN3-208ENST00000537981 UNKQ9C0B0 810 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms