RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 KRT80Q6KB66 452 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 XRRA1Q6P2D8 792 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 LYSMD3Q7Z3D4 306 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 PDIK1LQ8N165 341 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TMEM102Q8N9M5 508 aaPredicted RBP11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TERB1Q8NA31 727 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 HELQQ8TDG4 1101 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 DLG3Q92796 817 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 CCDC127Q96BQ5 260 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 COG8Q96MW5 612 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 PSD2Q9BQI7 771 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TMEM121Q9BTD3 319 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 MRPL46Q9H2W6 279 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 FAM96AQ9H5X1 160 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 DHX33Q9H6R0 707 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 CDC14AQ9UNH5 594 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 RBMX2Q9Y388 322 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 A0A087WXM4 84 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 C7orf72A4D263 438 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TRIM64BA6NI03 449 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TMX2-CTNND1H3BSU7 103 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 GIPC1O14908 333 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 PMM2O15305 246 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 SLC25A27O95847 323 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 SNRPAP09012 282 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 COX4I1P13073 169 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 KCNA2P16389 499 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 JAK1P23458 1154 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 GABRB3P28472 473 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 IGBP1P78318 339 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 SP2Q02086 613 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 DPYSQ14117 519 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 UGCGQ16739 394 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TRIM16LQ309B1 348 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 PDPK2PQ6A1A2 396 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 SLC26A11Q86WA9 606 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 DNERQ8NFT8 737 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 APBB2Q92870 758 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 GPRASP2Q96D09 838 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 ZNF778Q96MU6 729 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 SH2D3AQ9BRG2 576 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 ANLNQ9NQW6 1124 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TBC1D22BQ9NU19 505 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 DNAJC28Q9NX36 388 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 SEL1LQ9UBV2 794 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 CARD8Q9Y2G2 431 aa11.64□□□□□ -0.55
SEMA4D-221ENST00000537934 TMEM150BA6NC51 233 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 KRT37O76014 449 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 GJC1P36383 396 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 TRPC1P48995 793 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 DMPKQ09013 629 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 PEX6Q13608 980 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 MGAT5BQ3V5L5 792 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 FRA10AC1Q70Z53 315 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 SETD3Q86TU7 594 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 CPNE9Q8IYJ1 553 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 KCTD17Q8N5Z5 321 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 SLITRK1Q96PX8 696 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 TMEM79Q9BSE2 394 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 DNAJC16Q9Y2G8 782 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 MCM3APO60318 1980 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 TRPM7Q96QT4 1865 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 J3QRK9 145 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 WEE2P0C1S8 567 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 DCKP27707 260 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 EPHA3P29320 983 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 TTKP33981 857 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 RCVRNP35243 200 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 IDH3AP50213 366 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 CDH15P55291 814 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 STXBP2Q15833 593 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 ANKRD26P1Q6NSI1 321 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 C1orf186Q6ZWK4 172 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 VASH1Q7L8A9 365 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 FAM178BQ8IXR5 827 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 FIBCD1Q8N539 461 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 BHMTQ93088 406 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 FBXL8Q96CD0 374 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 MMP19Q99542 508 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 SENP7Q9BQF6 1050 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 SLC13A1Q9BZW2 595 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 C10orf88Q9H8K7 445 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 RAB20Q9NX57 234 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 VPS28Q9UK41 221 aa11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 PTBP2Q9UKA9 531 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-221ENST00000537934 ZNFX1Q9P2E3 1918 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 ANKRD34BA5PLL1 514 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 SPAG6O75602 509 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 ATF7P17544 494 aaPredicted RBP11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 ITGADQ13349 1161 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 KCTD2Q14681 263 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 OXA1LQ15070 435 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 PLA2G4FQ68DD2 849 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 ZCCHC23Q6ZST2 131 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 CYP2U1Q7Z449 544 aa11.62□□□□□ -0.55
SEMA4D-221ENST00000537934 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms