RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 HPS4Q9NQG7 708 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 DNAI1Q9UI46 699 aa25.01■■□□□ 1.59
HMGA2-208ENST00000537429 ARNTLO00327 626 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 ARSAP15289 507 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 EPHB2P29323 1055 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 IRAK1P51617 712 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 RPS24P62847 133 aaKnown RBP25■■□□□ 1.59
HMGA2-208ENST00000537429 DHCR24Q15392 516 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 RABGAP1LQ5R372 815 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 LY6G5CQ5SRR4 150 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 MPP7Q5T2T1 576 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 RFX8Q6ZV50 586 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 ANKS1BQ7Z6G8 1248 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 CFAP52Q8N1V2 620 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 FAF2Q96CS3 445 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 NAPGQ99747 312 aaPredicted RBP25■■□□□ 1.59
HMGA2-208ENST00000537429 ZYG11BQ9C0D3 744 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 CARD9Q9H257 536 aa25■■□□□ 1.59
HMGA2-208ENST00000537429 CTAGE9A4FU28 777 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 ESPNB1AK53 854 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 KCNK3O14649 394 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 NFATC1O95644 943 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 TUBB4AP04350 444 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 CDKN2BP42772 138 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 COPS2P61201 443 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 TNK2Q07912 1038 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 DPYSQ14117 519 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 TTC39BQ5VTQ0 682 aaPredicted RBP24.99■■□□□ 1.59
HMGA2-208ENST00000537429 FYB2Q5VWT5 728 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 RWDD4Q6NW29 188 aaKnown RBP24.99■■□□□ 1.59
HMGA2-208ENST00000537429 SPOCD1Q6ZMY3 1216 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 HJURPQ8NCD3 748 aaPredicted RBP24.99■■□□□ 1.59
HMGA2-208ENST00000537429 PSMB7Q99436 277 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 MPP6Q9NZW5 540 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 MARK1Q9P0L2 795 aa24.99■■□□□ 1.59
HMGA2-208ENST00000537429 DOCK4Q8N1I0 1966 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 C19orf67A6NJJ6 358 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 CNTN5O94779 1100 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 CYBBP04839 570 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 CYP17A1P05093 508 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 ZNF211Q13398 564 aaPredicted RBP24.98■■□□□ 1.59
HMGA2-208ENST00000537429 RUNX3Q13761 415 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 ALFQ53S48 1182 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 ANKRD20A8PQ5CZ79 823 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 TFDP3Q5H9I0 405 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 PAPD7Q5XG87 772 aaKnown RBP24.98■■□□□ 1.59
HMGA2-208ENST00000537429 CCDC50Q8IVM0 306 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 DDI1Q8WTU0 396 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 RNF157Q96PX1 679 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 BRD9Q9H8M2 597 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 ECT2Q9H8V3 914 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 STIM2Q9P246 746 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 SNX12Q9UMY4 172 aa24.98■■□□□ 1.59
HMGA2-208ENST00000537429 OTOL1A6NHN0 477 aaPredicted RBP24.97■■□□□ 1.59
HMGA2-208ENST00000537429 TBL1XO60907 577 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 PENKP01210 267 aaPredicted RBP24.97■■□□□ 1.59
HMGA2-208ENST00000537429 PPP2R5EQ16537 467 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 RNF43Q68DV7 783 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 AADACL2Q6P093 401 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 NLRP14Q86W24 1093 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 CIR1Q86X95 450 aaPredicted RBP24.97■■□□□ 1.59
HMGA2-208ENST00000537429 PCDH19Q8TAB3 1148 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 BBS2Q9BXC9 721 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 RETREG1Q9H6L5 497 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 CATSPERBQ9H7T0 1116 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 ARHGEF4Q9NR80 690 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 ZNF212Q9UDV6 495 aa24.97■■□□□ 1.59
HMGA2-208ENST00000537429 A0A1B0GVM2 712 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 TYW5A2RUC4 315 aaKnown RBP24.96■■□□□ 1.59
HMGA2-208ENST00000537429 TCAF2A6NFQ2 919 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 WASH4PA8MWX3 477 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 KIF2AO00139 706 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-208ENST00000537429 FGF10O15520 208 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-208ENST00000537429 DAPK3O43293 454 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 ZNF500O60304 480 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-208ENST00000537429 ADH1CP00326 375 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 RHOQP17081 205 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 ERCC2P18074 760 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 AMPD1P23109 780 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 HOXD9P28356 352 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-208ENST00000537429 CASQ1P31415 396 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 CXCR5P32302 372 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 CDH4P55283 916 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 BHMTQ93088 406 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 PLK2Q9NYY3 685 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 GTSE1Q9NYZ3 720 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 MYO10Q9HD67 2058 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 MYOFQ9NZM1 2061 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 TCF20Q9UGU0 1960 aaKnown RBP24.96■■□□□ 1.59
HMGA2-208ENST00000537429 hCG_1818297A0A087WSY0 165 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 HOXC11O43248 304 aaPredicted RBP24.96■■□□□ 1.59
HMGA2-208ENST00000537429 PRLRP16471 622 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 PTPN7P35236 360 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 CETN2P41208 172 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 GAD2Q05329 585 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 TDGQ13569 410 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 ANO4Q32M45 955 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 CHST9Q7L1S5 443 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 CPA6Q8N4T0 437 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 OSBPL9Q96SU4 736 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms