RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RUNX1T1Q06455 604 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DGUOKQ16854 277 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SCARA3Q6AZY7 606 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DCDC5Q6ZRR9 648 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SLC47A2Q86VL8 602 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SYTL1Q8IYJ3 562 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ANKLE1Q8NAG6 615 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 GLIS3Q8NEA6 775 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 FEZF2Q8TBJ5 459 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 CHID1Q9BWS9 393 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 FSD1LQ9BXM9 530 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 POLR1BQ9H9Y6 1135 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 CPNE5Q9HCH3 593 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SLC17A7Q9P2U7 560 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SCN11AQ9UI33 1791 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ADGRA2Q96PE1 1338 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TSPAN9O75954 239 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TMBIM6P55061 237 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PSMA8Q8TAA3 256 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SUN5Q8TC36 379 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PIWIL2Q8TC59 973 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 MED30Q96HR3 178 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PLEKHA8Q96JA3 519 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 MARK4Q96L34 752 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 CTRCQ99895 268 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 C12orf65Q9H3J6 166 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 RAD21L1Q9H4I0 556 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TCF7L2Q9NQB0 619 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ISPDA4D126 451 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TRIM24O15164 1050 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 VILLO15195 856 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 LZTS3O60299 673 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 BBOX1O75936 387 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 C6orf222P0C671 652 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 CYP11B1P15538 503 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 FGFR2P21802 821 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PEX2P28328 305 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 IL12AP29459 219 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ALDH3B2P48448 385 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 GSSP48637 474 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 LSM3P62310 102 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 MPP2Q14168 576 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DGKDQ16760 1214 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 C6orf52Q5T4I8 152 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SEL1L3Q68CR1 1132 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 LUZP2Q86TE4 346 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 AKAP14Q86UN6 197 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PCDH20Q8N6Y1 951 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 CD101Q93033 1021 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 NKD2Q969F2 451 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PNMA5Q96PV4 448 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ARPC5LQ9BPX5 153 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 RPAP3Q9H6T3 665 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF408Q9H9D4 720 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 VTA1Q9NP79 307 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ABCB10Q9NRK6 738 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DCDC2Q9UHG0 476 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ERVK-11Q9UQG0 969 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 NR5A2O00482 541 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 DNAJA2O60884 412 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ME2P23368 584 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SLC18A2Q05940 514 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 ZC3H12BQ5HYM0 836 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 POLR3FQ9H1D9 316 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CRNNQ9UBG3 495 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PLA2G4CQ9UP65 541 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 AXIN2Q9Y2T1 843 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 COL1A1P02452 1464 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 AKAP11Q9UKA4 1901 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 AGRPO00253 132 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 RAD51BO15315 384 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 GRAP2O75791 330 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PROSCO94903 275 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 MT-CO1P00395 513 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SERPINE1P05121 402 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PSAPP07602 524 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 MAPTP10636 758 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 COX4I1P13073 169 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 IREB2P48200 963 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SLC5A3P53794 718 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CSE1LP55060 971 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 RFTN1Q14699 578 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 CCDC142Q17RM4 750 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SLFN12LQ6IEE8 588 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SNRNP48Q6IEG0 339 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PGM2L1Q6PCE3 622 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PHC3Q8NDX5 983 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PHF21AQ96BD5 680 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 HSPBAP1Q96EW2 488 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 PAWRQ96IZ0 340 aaKnown RBP5.51□□□□□ -1.53
PTPRD-213ENST00000537002 SEPHS2Q99611 448 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 AGPAT3Q9NRZ7 376 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 DNAJC28Q9NX36 388 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 HSFX1Q9UBD0 423 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 APOA4P06727 396 aa5.51□□□□□ -1.53
PTPRD-213ENST00000537002 TKTP29401 623 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms