RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MORC3Q14149 939 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TEAD4Q15561 434 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 ZNF776Q68DI1 518 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 GLRX5Q86SX6 157 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CARNMT1Q8N4J0 409 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 BIRC7Q96CA5 298 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 LMLNQ96KR4 655 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 KREMEN1Q96MU8 473 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TRIM62Q9BVG3 475 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SGK2Q9HBY8 427 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 OSGEPQ9NPF4 335 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CNTN6Q9UQ52 1028 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 NAALADL1Q9UQQ1 740 aa20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.41■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CELSR3Q9NYQ7 3312 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 KRT5P13647 590 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MARSP56192 900 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 RPS24P62847 133 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 TP53BP1Q12888 1972 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 CDH18Q13634 790 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MS4A13Q5J8X5 152 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 PNPLA1Q8N8W4 532 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MYO19Q96H55 970 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SLC39A13Q96H72 371 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 INTS2Q9H0H0 1204 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 RSPH9Q9H1X1 276 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 MTG2Q9H4K7 406 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SCML1Q9UN30 329 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 NCKAP1Q9Y2A7 1128 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 PCDHGB2Q9Y5G2 931 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 SLCO1B1Q9Y6L6 691 aa20.4■□□□□ 0.86
TNFRSF1B-204ENST00000536782 BIN1O00499 593 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 CAPN9O14815 690 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 MED7O43513 233 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 FSBPO95073 299 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 MOCS2O96007 188 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 CAPNS1P04632 268 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 CD27P26842 260 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 CSKP41240 450 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 GRIA4P48058 902 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 STX17P56962 302 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 PAK1Q13153 545 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 KIF19Q2TAC6 998 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 HNRNPA1L2Q32P51 320 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SYPL2Q5VXT5 272 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 DBX2Q6ZNG2 339 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 USP30Q70CQ3 517 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 BEND5Q7L4P6 421 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 ADAM32Q8TC27 787 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 STK32AQ8WU08 396 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 MYEOVQ96EZ4 313 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SRRTQ9BXP5 876 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 NUCKS1Q9H1E3 243 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 TM9SF3Q9HD45 589 aa20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 INTS6Q9UL03 887 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1B-204ENST00000536782 FLRT2O43155 660 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 RNASEH1O60930 286 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 LETM1O95202 739 aaPredicted RBP20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 MOCS3O95396 460 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 APOEP02649 317 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SFSWAPQ12872 951 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SUZ12Q15022 739 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 MEA1Q16626 185 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 DCAF6Q58WW2 860 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 DENND1BQ6P3S1 775 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SLCO6A1Q86UG4 719 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 TAC4Q86UU9 113 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 CFAP52Q8N1V2 620 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 KDM1BQ8NB78 822 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 RHBDD1Q8TEB9 315 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 GANCQ8TET4 914 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 MRGPRX3Q96LB0 322 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SLC4A5Q9BY07 1137 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 PABPC3Q9H361 631 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 UBE2TQ9NPD8 197 aaPredicted RBP20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 ANKRD6Q9Y2G4 727 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SNX11Q9Y5W9 270 aa20.38■□□□□ 0.85
TNFRSF1B-204ENST00000536782 SIN3BO75182 1162 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 LUC7L3O95232 432 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 HOXB3P14651 431 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 FSCBQ5H9T9 825 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 PITRM1Q5JRX3 1037 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 DHX40Q8IX18 779 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 LGI2Q8N0V4 545 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 BAHD1Q8TBE0 780 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 ZNF606Q8WXB4 792 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 MED15Q96RN5 788 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 CDC6Q99741 560 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 POPDC2Q9HBU9 364 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 FBXL12Q9NXK8 326 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 KIAA1522Q9P206 1035 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 TJP2Q9UDY2 1190 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 XPO7Q9UIA9 1087 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 ERVW-1Q9UQF0 538 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 ADAMTS20P59510 1910 aa20.37■□□□□ 0.85
TNFRSF1B-204ENST00000536782 E5RJQ4 531 aa20.36■□□□□ 0.85
TNFRSF1B-204ENST00000536782 TAF4O00268 1085 aa20.36■□□□□ 0.85
TNFRSF1B-204ENST00000536782 PAPSS1O43252 624 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF1B-204ENST00000536782 THAP12O43422 761 aa20.36■□□□□ 0.85
TNFRSF1B-204ENST00000536782 FGFR1OPO95684 399 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms