RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SLC12A6Q9UHW9 1150 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 MBD1Q9UIS9 605 aaPredicted RBP13.61□□□□□ -0.23
PRKDC-206ENST00000536429 GMEB2Q9UKD1 530 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
PRKDC-206ENST00000536429 GOLGA6L19H0YKK7 550 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 P2RY2P41231 377 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 CSKP41240 450 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 CTSOP43234 321 aaPredicted RBP13.6□□□□□ -0.23
PRKDC-206ENST00000536429 UBASH3AP57075 661 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 TPM4P67936 248 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 ATP11AP98196 1134 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 SPEM2Q0P670 501 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 CDH18Q13634 790 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 NFKBIBQ15653 356 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 ASIC2Q16515 512 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 CCDC14Q49A88 953 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 USP39Q53GS9 565 aaKnown RBP13.6□□□□□ -0.23
PRKDC-206ENST00000536429 ZNF571Q7Z3V5 609 aaPredicted RBP13.6□□□□□ -0.23
PRKDC-206ENST00000536429 FAM131BQ86XD5 332 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 ZNF683Q8IZ20 524 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 APCDD1Q8J025 514 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 OR52K2Q8NGK3 314 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 UCMAQ8WVF2 138 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 RXFP2Q8WXD0 754 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 ZC3H10Q96K80 434 aaKnown RBP13.6□□□□□ -0.23
PRKDC-206ENST00000536429 MRGPRX1Q96LB2 322 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 MKRN2Q9H000 416 aaKnown RBP13.6□□□□□ -0.23
PRKDC-206ENST00000536429 SIK2Q9H0K1 926 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 MTG2Q9H4K7 406 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 WDCPQ9H6R7 721 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 RRN3Q9NYV6 651 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 IFNKQ9P0W0 207 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 VANGL2Q9ULK5 521 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 MYO6Q9UM54 1294 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 CEP250Q9BV73 2442 aa13.6□□□□□ -0.23
PRKDC-206ENST00000536429 LAMA1P25391 3075 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 TCRBV5S1A1TA0A578 114 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 TYW5A2RUC4 315 aaKnown RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 C2CD4BA6NLJ0 364 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 TMCO5BA8MYB1 307 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 H0Y626 953 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 TIMM44O43615 452 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 CNTN5O94779 1100 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 CAVIN2O95810 425 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 EPHX1P07099 455 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 DLDP09622 509 aaKnown RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 SKILP12757 684 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 MZF1P28698 734 aaPredicted RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 RFC1P35251 1148 aaPredicted RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 CDO1Q16878 200 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 FNDC3BQ53EP0 1204 aaKnown RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 BRMS1LQ5PSV4 323 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 SERPINA13PQ6UXR4 307 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 ARCQ7LC44 396 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 CACUL1Q86Y37 369 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 CCAR2Q8N163 923 aaKnown RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 TTC17Q96AE7 1141 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 MYO19Q96H55 970 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 MRGPRX3Q96LB0 322 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 RPRD1AQ96P16 312 aaPredicted RBP13.59□□□□□ -0.23
PRKDC-206ENST00000536429 MAGEB5Q9BZ81 275 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 ARRDC1-AS1Q9H2J1 176 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 TMEM245Q9H330 911 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 SMOC1Q9H4F8 434 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 HAUS4Q9H6D7 363 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 AIPL1Q9NZN9 384 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 EML5Q05BV3 1969 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 SPTBN4Q9H254 2564 aa13.59□□□□□ -0.23
PRKDC-206ENST00000536429 ABCA7Q8IZY2 2146 aa13.58□□□□□ -0.23
PRKDC-206ENST00000536429 DDX3XO00571 662 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRKDC-206ENST00000536429 ENDOD1O94919 500 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 EPN2O95208 641 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 CALB1P05937 261 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 KRT3P12035 628 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 PDGFRAP16234 1089 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 POLR2EP19388 210 aaKnown RBP13.58□□□□□ -0.24
PRKDC-206ENST00000536429 TNFAIP3P21580 790 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 RRM1P23921 792 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 RDXP35241 583 aaKnown RBP13.58□□□□□ -0.24
PRKDC-206ENST00000536429 COPAP53621 1224 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 GSCP56915 257 aaPredicted RBP13.58□□□□□ -0.24
PRKDC-206ENST00000536429 STARD3Q14849 445 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 ALFQ53S48 1182 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 RABGAP1LQ5R372 815 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 PMS2CLQ68D20 193 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 ACAD10Q6JQN1 1059 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 WDR59Q6PJI9 974 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 KIAA1324Q6UXG2 1013 aaKnown RBP13.58□□□□□ -0.24
PRKDC-206ENST00000536429 MCOLN2Q8IZK6 566 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 C3orf20Q8ND61 904 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 USP18Q9UMW8 372 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 CYP8B1Q9UNU6 501 aa13.58□□□□□ -0.24
PRKDC-206ENST00000536429 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.57□□□□□ -0.24
PRKDC-206ENST00000536429 IGHV1OR15-9A0A0B4J2B8 117 aa13.57□□□□□ -0.24
PRKDC-206ENST00000536429 A0A1B0GVM2 712 aa13.57□□□□□ -0.24
PRKDC-206ENST00000536429 TCAF2A6NFQ2 919 aa13.57□□□□□ -0.24
PRKDC-206ENST00000536429 NPC1O15118 1278 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms