RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 SCINQ9Y6U3 715 aa11.69□□□□□ -0.54
TNFRSF1A-208ENST00000536194 IGLV3-10A0A075B6K4 115 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 A0A1B0GVM2 712 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TCAF2A6NFQ2 919 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FAM72CH0Y354 149 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SGK1O00141 431 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 AKR1B10O60218 316 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ADAM23O75077 832 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CNTN5O94779 1100 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PAPSS2O95340 614 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 KLF8O95600 359 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SP9P0CG40 484 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PABPC1P11940 636 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PSMA2P25787 234 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CXCL12P48061 93 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CCR3P51677 355 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MRPS21P82921 87 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CSTF1Q05048 431 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 LMAN2Q12907 356 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FUT11Q495W5 492 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PREPLQ4J6C6 727 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FAM72AQ5TYM5 149 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MANEALQ5VSG8 457 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FAM72DQ6L9T8 149 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CXorf57Q6NSI4 855 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TMEM92Q6UXU6 159 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CHST9Q7L1S5 443 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ANKS1BQ7Z6G8 1248 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FAM72BQ86X60 149 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CCAR2Q8N163 923 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PYROXD2Q8N2H3 581 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ZNF513Q8N8E2 541 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TXNDC5Q8NBS9 432 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FIBINQ8TAL6 211 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SORCS1Q8WY21 1168 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NTAN1Q96AB6 310 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 BTBD6Q96KE9 485 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 C1orf74Q96LT6 269 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CCDC42Q96M95 316 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 RPRD1AQ96P16 312 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PANX2Q96RD6 677 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NUP85Q9BW27 656 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 KCNH6Q9H252 994 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TMEM51Q9NW97 253 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MPP6Q9NZW5 540 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ZNF212Q9UDV6 495 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 GGA2Q9UJY4 613 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FZD10Q9ULW2 581 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MMP17Q9ULZ9 603 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PAXBP1Q9Y5B6 917 aa11.68□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TYW5A2RUC4 315 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SOWAHDA6NJG2 315 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 DRGXA6NNA5 263 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 E9PAM4 449 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 LRCH4O75427 683 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TCF4P15884 667 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NUMBP49757 651 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NRG1Q02297 640 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 DMWDQ09019 674 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SCAPQ12770 1279 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CDH18Q13634 790 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 DMC1Q14565 340 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 RABGAP1LQ5R372 815 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SCYL2Q6P3W7 929 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SYT13Q7L8C5 426 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SLFN11Q7Z7L1 901 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CPNE8Q86YQ8 564 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 APCDD1Q8J025 514 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SPC24Q8NBT2 197 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 NELL1Q92832 810 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PRRX2Q99811 253 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 OSBPL2Q9H1P3 480 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CD248Q9HCU0 757 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MRPL47Q9HD33 250 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 GPATCH2LQ9NWQ4 482 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ELOVL2Q9NXB9 296 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ANAPC7Q9UJX3 599 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 FBXO4Q9UKT5 387 aa11.67□□□□□ -0.54
TNFRSF1A-208ENST00000536194 WASH3PC4AMC7 463 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 H0Y626 953 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SRGAP2O75044 1071 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ATG13O75143 517 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 H2AFZP0C0S5 128 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 TMEM253P0C7T8 217 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 IL1R2P27930 398 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MIPP30301 263 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CSKP41240 450 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 WASP42768 502 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PTPN5P54829 565 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CDH4P55283 916 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 SEMA3BQ13214 749 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ENPP2Q13822 863 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ZNF234Q14588 700 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 CA9Q16790 459 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 PITRM1Q5JRX3 1037 aa11.66□□□□□ -0.54
TNFRSF1A-208ENST00000536194 MBLAC2Q68D91 279 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms