RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TPM2P07951 284 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 UNGP13051 313 aaPredicted RBP16.95■□□□□ 0.3
ATL3-202ENST00000535789 SCNN1AP37088 669 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 CTSOP43234 321 aaPredicted RBP16.95■□□□□ 0.3
ATL3-202ENST00000535789 NUMBP49757 651 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 TPM4P67936 248 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 NME3Q13232 169 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 E4F1Q66K89 784 aaPredicted RBP16.95■□□□□ 0.3
ATL3-202ENST00000535789 ARMCX6Q7L4S7 300 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 C14orf80Q86SX3 495 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 ERICH1Q86X53 443 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 ZNF677Q86XU0 584 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 CACUL1Q86Y37 369 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 ZDHHC17Q8IUH5 632 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 TMEFF1Q8IYR6 380 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 ZNF683Q8IZ20 524 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 PGBD3Q8N328 593 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 CARNMT1Q8N4J0 409 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 GPR161Q8N6U8 529 aaKnown RBP16.95■□□□□ 0.3
ATL3-202ENST00000535789 NEK11Q8NG66 645 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 OR52K2Q8NGK3 314 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 BAP1Q92560 729 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 IGSF8Q969P0 613 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 MRGPRX3Q96LB0 322 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 PDCL3Q9H2J4 239 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 MTG2Q9H4K7 406 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
ATL3-202ENST00000535789 METTL5Q9NRN9 209 aaKnown RBP16.95■□□□□ 0.3
ATL3-202ENST00000535789 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.95■□□□□ 0.3
ATL3-202ENST00000535789 CYP8B1Q9UNU6 501 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 DAAM1Q9Y4D1 1078 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 PCDHGA5Q9Y5G8 931 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 SNX10Q9Y5X0 201 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 HS3ST4Q9Y661 456 aa16.95■□□□□ 0.3
ATL3-202ENST00000535789 CNOT1A5YKK6 2376 aaKnown RBP16.94■□□□□ 0.3
ATL3-202ENST00000535789 NPC1O15118 1278 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 PAGE1O75459 146 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 ZNF806P0C7X5 589 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 CDK11BP21127 795 aaKnown RBP16.94■□□□□ 0.3
ATL3-202ENST00000535789 MMP8P22894 467 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 CCR1P32246 355 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 CSKP41240 450 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 STAT1P42224 750 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 SULT1E1P49888 294 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 RNASE9P60153 205 aaKnown RBP16.94■□□□□ 0.3
ATL3-202ENST00000535789 CREB5Q02930 508 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 LMNB2Q03252 620 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 ELF2Q15723 593 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 SDE2Q6IQ49 451 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 CXorf57Q6NSI4 855 aaKnown RBP16.94■□□□□ 0.3
ATL3-202ENST00000535789 FBXL22Q6P050 247 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 PHLDB2Q86SQ0 1253 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 APCDD1Q8J025 514 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 EMC1Q8N766 993 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 ATP6V0D2Q8N8Y2 350 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 SLC30A5Q8TAD4 765 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 UCMAQ8WVF2 138 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 PGAP3Q96FM1 320 aaPredicted RBP16.94■□□□□ 0.3
ATL3-202ENST00000535789 SPACA7Q96KW9 195 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 NAP1L5Q96NT1 182 aaPredicted RBP16.94■□□□□ 0.3
ATL3-202ENST00000535789 SPAG5Q96R06 1193 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 C11orf70Q9BRQ4 267 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 SYT11Q9BT88 431 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 ARHGEF38Q9NXL2 777 aa16.94■□□□□ 0.3
ATL3-202ENST00000535789 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATL3-202ENST00000535789 USP36Q9P275 1121 aaKnown RBP16.94■□□□□ 0.3
ATL3-202ENST00000535789 F5H5T6 163 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 RHOBTB1O94844 696 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 EPHX1P07099 455 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 C7P10643 843 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 DHPSP49366 369 aaPredicted RBP16.93■□□□□ 0.3
ATL3-202ENST00000535789 CXCR3P49682 368 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 CAMK2GQ13555 558 aaPredicted RBP16.93■□□□□ 0.3
ATL3-202ENST00000535789 PITRM1Q5JRX3 1037 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 SARM1Q6SZW1 724 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 KIAA1324Q6UXG2 1013 aaKnown RBP16.93■□□□□ 0.3
ATL3-202ENST00000535789 SERPINA13PQ6UXR4 307 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 SLC41A1Q8IVJ1 513 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 CCAR2Q8N163 923 aaKnown RBP16.93■□□□□ 0.3
ATL3-202ENST00000535789 DEFB119Q8N690 84 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 ANKRD20A12PQ8NF67 263 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 JOSD2Q8TAC2 188 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 TTC17Q96AE7 1141 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 PCMTD1Q96MG8 357 aaPredicted RBP16.93■□□□□ 0.3
ATL3-202ENST00000535789 CFAP57Q96MR6 1250 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 DDX50Q9BQ39 737 aaKnown RBP16.93■□□□□ 0.3
ATL3-202ENST00000535789 TTYH3Q9C0H2 523 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 TMEM74BQ9NUR3 256 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 VANGL2Q9ULK5 521 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 SPEGQ15772 3267 aa16.93■□□□□ 0.3
ATL3-202ENST00000535789 A0A1B0GTH6 734 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.92■□□□□ 0.3
ATL3-202ENST00000535789 TCRBV5S1A1TA0A578 114 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 DLDP09622 509 aaKnown RBP16.92■□□□□ 0.3
ATL3-202ENST00000535789 FANCCQ00597 558 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 ARID5AQ03989 594 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 CDH18Q13634 790 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 AUHQ13825 339 aaKnown RBP16.92■□□□□ 0.3
ATL3-202ENST00000535789 CLEC16AQ2KHT3 1053 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 C5orf22Q49AR2 442 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms