RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 NDST4Q9H3R1 872 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 ST7Q9NRC1 585 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 GGA2Q9UJY4 613 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 SLC6A14Q9UN76 642 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 PLA2G4CQ9UP65 541 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 NAALADL1Q9UQQ1 740 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 PCDHB3Q9Y5E6 796 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 NYNRINQ9P2P1 1898 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 TSPAN3O60637 253 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 TBL1XO60907 577 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 KCNK5O95279 499 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 TRUB2O95900 331 aaKnown RBP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 ATP5BP06576 529 aaKnown RBP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SLC2A3P11169 496 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SGSHP51688 502 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SNX16P57768 344 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 BPIFB4P59827 614 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SHC2P98077 582 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 ZBTB16Q05516 673 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 PTPRNQ16849 979 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 TPD52L1Q16890 204 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 ARHGAP44Q17R89 818 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 DPCR1Q3MIW9 517 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 VWA3BQ502W6 1294 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 MS4A13Q5J8X5 152 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 EFHC1Q5JVL4 640 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 MBLAC2Q68D91 279 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 RFWD3Q6PCD5 774 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SERPINA13PQ6UXR4 307 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 RBM43Q6ZSC3 357 aaKnown RBP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 TAC4Q86UU9 113 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 ZNF397Q8NF99 534 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SORCS1Q8WY21 1168 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 PRCCQ92733 491 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SIPA1Q96FS4 1042 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 BTN2A3PQ96KV6 586 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 PRICKLE1Q96MT3 831 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 TUBGCP2Q9BSJ2 902 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 CIPCQ9C0C6 399 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 ACP6Q9NPH0 428 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 LMBRD1Q9NUN5 540 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 ABCB8Q9NUT2 735 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SUSD2Q9UGT4 822 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 SUN2Q9UH99 717 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 CYP8B1Q9UNU6 501 aa11.19□□□□□ -0.62
CCDC60-202ENST00000535685 GOLGA6L7A0A1B0GV03 622 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 TYW5A2RUC4 315 aaKnown RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 KCNU1A8MYU2 1149 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 FOXN3O00409 490 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 CAPN9O14815 690 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 HSF2BPO75031 334 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 NDUFS2O75306 463 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 APOEP02649 317 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 ASLP04424 464 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 EPHX1P07099 455 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 CEACAM1P13688 526 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 ENGP17813 658 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 POLR2EP19388 210 aaKnown RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 EEF1GP26641 437 aaKnown RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 PMLP29590 882 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 CD70P32970 193 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 CDH5P33151 784 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 SCNN1AP37088 669 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 TPMTP51580 245 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 ARID5AQ03989 594 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 WDR45BQ5MNZ6 344 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 SYCP2LQ5T4T6 812 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 BRICD5Q6PL45 260 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 KIAA1324Q6UXG2 1013 aaKnown RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 ARMCX6Q7L4S7 300 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 SLC26A9Q7LBE3 791 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 ZDHHC17Q8IUH5 632 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 CREBRFQ8IUR6 639 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 ENOX1Q8TC92 643 aaKnown RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 WFDC5Q8TCV5 224 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 MYO19Q96H55 970 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 PPP1R13BQ96KQ4 1090 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 HSPA12BQ96MM6 686 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 NOX5Q96PH1 765 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 CPXM1Q96SM3 734 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 PRMT1Q99873 361 aaKnown RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 NUP58Q9BVL2 599 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 NAA15Q9BXJ9 866 aaKnown RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 SLC6A17Q9H1V8 727 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 DNAJC12Q9UKB3 198 aa11.18□□□□□ -0.62
CCDC60-202ENST00000535685 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
CCDC60-202ENST00000535685 CHD5Q8TDI0 1954 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 METTL12A8MUP2 240 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 KCNJ18B7U540 433 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 LUC7L3O95232 432 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 SRPRAP08240 638 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 KRT9P35527 623 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 USP8P40818 1118 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 GABRB2P47870 512 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 RPS24P62847 133 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 CDK17Q00537 523 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms