RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 MBTPS2O43462 519 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 GREM1O60565 184 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 LATS1O95835 1130 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 APOEP02649 317 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 RARAP10276 462 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 EZRP15311 586 aaKnown RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SSR1P43307 286 aaKnown RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 KCNQ1P51787 676 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SLC7A5Q01650 507 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 CRYMQ14894 314 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 RPS6KA1Q15418 735 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 CLUL1Q15846 466 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 LEXMQ3ZCV2 418 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 ERMARDQ5T6L9 678 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 RNF187Q5TA31 235 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 TXNRD3NBQ6F5E7 133 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 GET4Q7L5D6 327 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 CCDC185Q8N715 623 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 ATP6V0D2Q8N8Y2 350 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 ZSCAN18Q8TBC5 510 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 BTN2A3PQ96KV6 586 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 ASB16Q96NS5 453 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 TKTL2Q9H0I9 626 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 OSBPL2Q9H1P3 480 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 CNOT10Q9H9A5 744 aaKnown RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 EPB41L5Q9HCM4 733 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SLC40A1Q9NP59 571 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 ANLNQ9NQW6 1124 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SMPD4Q9NXE4 827 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 DDX56Q9NY93 547 aaKnown RBP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SUFUQ9UMX1 484 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCARB1-204ENST00000535005 BHMG1C9JSJ3 638 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 LEFTY2O00292 366 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 DDX3YO15523 660 aaKnown RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 DNAJC8O75937 253 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 KRT14P02533 472 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CARSP49589 748 aaKnown RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 HARS2P49590 506 aaKnown RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 GUCY1A3Q02108 690 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 GUCY2DQ02846 1103 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 FAM78AQ5JUQ0 283 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 PARP9Q8IXQ6 854 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 KATNAL2Q8IYT4 538 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 UBL4BQ8N7F7 174 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 KRT35Q92764 455 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 SMARCD2Q92925 531 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CENPTQ96BT3 561 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 PBKQ96KB5 322 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 C1orf74Q96LT6 269 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CCDC114Q96M63 670 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 MYADMQ96S97 322 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 SNRNP25Q9BV90 132 aaKnown RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 KDM4CQ9H3R0 1056 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 OBP2AQ9NY56 170 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 STOML2Q9UJZ1 356 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 NFU1Q9UMS0 254 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 DENND4AQ7Z401 1863 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 E2F8A0AVK6 867 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 E7EVH7 732 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 PRAMEF12O95522 483 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 KLKB1P03952 638 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 HMBSP08397 361 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 ARSEP51690 589 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 ZNF135P52742 658 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 MLLT6P55198 1093 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 NRG1Q02297 640 aaPredicted RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 USP4Q13107 963 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 XRCC4Q13426 336 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 SLMAPQ14BN4 828 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 DPYSL2Q16555 572 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 EFHC2Q5JST6 749 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 Q6ZNB5 142 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 OTOP3Q7RTS5 596 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 SH2D3CQ8N5H7 860 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CELF5Q8N6W0 485 aaKnown RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 SH3RF2Q8TEC5 729 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 WBP2Q969T9 261 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 E2F7Q96AV8 911 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 ZWILCHQ9H900 591 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CFAP97Q9P2B7 532 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 LSM7Q9UK45 103 aaKnown RBP12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 PLAAQ9Y263 795 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 ZNF510Q9Y2H8 683 aa12.69□□□□□ -0.38
SCARB1-204ENST00000535005 CCDC188H7C350 402 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 ACSL4O60488 711 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 PAGE1O75459 146 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 GSTA1P08263 222 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 LAMP2P13473 410 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 CORO1AP31146 461 aaKnown RBP12.68□□□□□ -0.38
SCARB1-204ENST00000535005 MARCKSL1P49006 195 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 SLC11A2P49281 568 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms