RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 RNF169Q8NCN4 708 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 TMIEQ8NEW7 156 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 TFAP2CQ92754 450 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 SCAMP4Q969E2 229 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 KLHL32Q96NJ5 620 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 SLC38A3Q99624 504 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 PLA2G12BQ9BX93 195 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 CPEB1Q9BZB8 566 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 NELFAQ9H3P2 528 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 SEC61A2Q9H9S3 476 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 MRPS18AQ9NVS2 196 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 MIS18AQ9NYP9 233 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 PCDHGB3Q9Y5G1 929 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 PLXNB3Q9ULL4 1909 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 APCP25054 2843 aa5.14□□□□□ -1.59
ECHDC1-223ENST00000534442 KANSL1LA0AUZ9 987 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 FSD2A1L4K1 749 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 CDHR4A6H8M9 788 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 E9PLN8 166 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 TAF5LO75529 589 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 PRSS23O95084 383 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 EPN2O95208 641 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 ITGB1P05556 798 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 ANXA2P07355 339 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 ALAS1P13196 640 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 EEF1GP26641 437 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 MAGEA9P43362 315 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 RAP1GAPP47736 663 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 KCNC1P48547 511 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 SLC11A2P49281 568 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 ZNF135P52742 658 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 UCP3P55916 312 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 STARD6P59095 220 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 PPP2CBP62714 309 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 PPP2CAP67775 309 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 MTAPQ13126 283 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 RAB32Q13637 225 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 KCNC3Q14003 757 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 PUM3Q15397 648 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 HSP90AB4PQ58FF6 505 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 FKBP15Q5T1M5 1219 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 TMEM63BQ5T3F8 832 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 ATXN7L2Q5T6C5 722 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 NT5DC1Q5TFE4 455 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 DCAF12L1Q5VU92 463 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 TCERG1LQ5VWI1 586 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 LMBRD2Q68DH5 695 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 BORAQ6PGQ7 559 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 TXLNBQ8N3L3 684 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 SLC15A4Q8N697 577 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 SPPL3Q8TCT6 385 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 AFAP1L1Q8TED9 768 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 C18orf8Q96DM3 657 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 IQCDQ96DY2 449 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 MED8Q96G25 268 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 TMEM176AQ96HP8 235 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 LRRC37BQ96QE4 947 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 LMF1Q96S06 567 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 VKORC1Q9BQB6 163 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 TINAGL1Q9GZM7 467 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 OSBPL5Q9H0X9 879 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 MEGF9Q9H1U4 602 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 CHST8Q9H2A9 424 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 SLC32A1Q9H598 525 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 MSL2Q9HCI7 577 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 SERHLQ9NQF3 203 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 IGSF9Q9P2J2 1179 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 PLEKHM1Q9Y4G2 1056 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 ASTN1O14525 1302 aa5.13□□□□□ -1.59
ECHDC1-223ENST00000534442 RP1L1Q8IWN7 2480 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 DDTLA6NHG4 134 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 C19orf81C9J6K1 198 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 NUAK1O60285 661 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 PPFIA4O75335 1185 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 SNAI1O95863 264 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 GNAI2P04899 355 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 GRPP07492 148 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 PIM1P11309 404 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 FCER1AP12319 257 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 FDXRP22570 491 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 PDIA3P30101 505 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 MPLP40238 635 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 CXADRP78310 365 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 ITIH3Q06033 890 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 CHRNDQ07001 517 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 GALNT1Q10472 559 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 STARD3Q14849 445 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 ELF2Q15723 593 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 PDCD2Q16342 344 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 TLDC1Q6P9B6 456 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 CATSPERGQ6ZRH7 1159 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 ARHGEF18Q6ZSZ5 1173 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 LRRC8DQ7L1W4 858 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 MCM10Q7L590 875 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 APBB1IPQ7Z5R6 666 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 PPP1R32Q7Z5V6 425 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 TAX1BP1Q86VP1 789 aa5.12□□□□□ -1.59
ECHDC1-223ENST00000534442 LGI4Q8N135 537 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms