RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TFAP2BQ92481 460 aa22.14■■□□□ 1.13
SSH3-211ENST00000534112 AZIN2Q96A70 460 aa22.14■■□□□ 1.13
SSH3-211ENST00000534112 SLC6A18Q96N87 628 aa22.14■■□□□ 1.13
SSH3-211ENST00000534112 GOLPH3LQ9H4A5 285 aa22.14■■□□□ 1.13
SSH3-211ENST00000534112 SERGEFQ9UGK8 458 aa22.14■■□□□ 1.13
SSH3-211ENST00000534112 INTS6Q9UL03 887 aaKnown RBP22.14■■□□□ 1.13
SSH3-211ENST00000534112 PIK3R2O00459 728 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 RNASEH1O60930 286 aaKnown RBP22.13■■□□□ 1.13
SSH3-211ENST00000534112 ZNF202O95125 648 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 CSKP41240 450 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 TBX4P57082 545 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 LRMPQ12912 555 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 NADSYN1Q6IA69 706 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 NCEH1Q6PIU2 408 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 TMPRSS12Q86WS5 348 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 GATAD2AQ86YP4 633 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 ELF4Q99607 663 aaPredicted RBP22.13■■□□□ 1.13
SSH3-211ENST00000534112 NEUROG2Q9H2A3 272 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 EBF2Q9HAK2 575 aa22.13■■□□□ 1.13
SSH3-211ENST00000534112 MUC22E2RYF6 1773 aaPredicted RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 A0A1W2PP55 124 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 A0A1W2PQ27 194 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 A0A1W2PQ64 194 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 MID1O15344 667 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 SLC16A3O15427 465 aaKnown RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 ASLP04424 464 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 TBXAS1P24557 533 aaPredicted RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 RPS24P62847 133 aaKnown RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 SFSWAPQ12872 951 aaKnown RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 ARID5BQ14865 1188 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 CST6Q15828 149 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 C9orf64Q5T6V5 341 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 DHX40Q8IX18 779 aaKnown RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 HJURPQ8NCD3 748 aaPredicted RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 SKA1Q96BD8 255 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 MYEOVQ96EZ4 313 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 MRGPRX3Q96LB0 322 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 PRICKLE1Q96MT3 831 aaPredicted RBP22.12■■□□□ 1.13
SSH3-211ENST00000534112 ZDHHC9Q9Y397 364 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 PCDHGA1Q9Y5H4 931 aa22.12■■□□□ 1.13
SSH3-211ENST00000534112 LRRC72A6NJI9 287 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 E9PAM4 449 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 LTFP02788 710 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 WNT1P04628 370 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 PAEPP09466 180 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 PRCPP42785 496 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 FKBP3Q00688 224 aaKnown RBP22.11■■□□□ 1.13
SSH3-211ENST00000534112 CNGA2Q16280 664 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 TMEM270Q6UE05 265 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 MMAAQ8IVH4 418 aaKnown RBP22.11■■□□□ 1.13
SSH3-211ENST00000534112 KDM1BQ8NB78 822 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 CLEC4CQ8WTT0 213 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 DDX50Q9BQ39 737 aaKnown RBP22.11■■□□□ 1.13
SSH3-211ENST00000534112 ZSWIM1Q9BR11 485 aa22.11■■□□□ 1.13
SSH3-211ENST00000534112 GCN1Q92616 2671 aaKnown RBP22.1■■□□□ 1.13
SSH3-211ENST00000534112 PLK4O00444 970 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 RNASEH2AO75792 299 aaKnown RBP22.1■■□□□ 1.13
SSH3-211ENST00000534112 KCNJ12Q14500 433 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 SHBQ15464 509 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 FSCBQ5H9T9 825 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 ANKRD40Q6AI12 368 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 MMS22LQ6ZRQ5 1243 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 CARNMT1Q8N4J0 409 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 OR2T34Q8NGX1 318 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 SLC35C1Q96A29 364 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 CRELD1Q96HD1 420 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 FCRL2Q96LA5 508 aaPredicted RBP22.1■■□□□ 1.13
SSH3-211ENST00000534112 TSG101Q99816 390 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 OMDQ99983 421 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 AASDHPPTQ9NRN7 309 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 ADAMTS1Q9UHI8 967 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 ERVW-1Q9UQF0 538 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 BPTFQ12830 3046 aa22.1■■□□□ 1.13
SSH3-211ENST00000534112 TARSL2A2RTX5 802 aaKnown RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 TYW5A2RUC4 315 aaKnown RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 EIF4E1BA6NMX2 242 aaKnown RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 TTC34A8MYJ7 566 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 C10orf142B7Z368 130 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 RNF225M0QZC1 329 aaPredicted RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 CBX4O00257 560 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 ENC1O14682 589 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 LDOC1O95751 146 aaPredicted RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 FYNP06241 537 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 ITGAVP06756 1048 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 JUPP14923 745 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 ABCB4P21439 1286 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 CD38P28907 300 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 SLC8A1P32418 973 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 CTSOP43234 321 aaPredicted RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 CDH18Q13634 790 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 CCDC117Q8IWD4 279 aaPredicted RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 SAP25Q8TEE9 199 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 CNDP2Q96KP4 475 aaKnown RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 HSFY1Q96LI6 401 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 FAM129BQ96TA1 746 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 NUCKS1Q9H1E3 243 aaKnown RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 ARMCX3Q9UH62 379 aaPredicted RBP22.09■■□□□ 1.13
SSH3-211ENST00000534112 FZD4Q9ULV1 537 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 PCDHB4Q9Y5E5 795 aa22.09■■□□□ 1.13
SSH3-211ENST00000534112 TMEM131Q92545 1883 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms