RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 TBC1D3DA0A087WVF3 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3IA0A087WXS9 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3EA0A087X179 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3KA0A087X1G2 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 GOLGA6L7A0A1B0GV03 622 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3FA6NER0 549 aaPredicted RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3LB9A6J9 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TULP2O00295 520 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 SLC28A2O43868 658 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 MPOP05164 745 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 SLFN14P0C7P3 912 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3HP0C7X1 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 MAT2AP31153 395 aaKnown RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 SLC8A1P32418 973 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 ANP32AP39687 249 aaKnown RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 CSKP41240 450 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 NASPP49321 788 aaPredicted RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 NUMBP49757 651 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 CCR5P51681 352 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 VAMP7P51809 220 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 PPP2CBP62714 309 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 PPP2CAP67775 309 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 GABREP78334 506 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 KCNC4Q03721 635 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 ADIGQ0VDE8 80 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 ILKQ13418 452 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 GOLGA7BQ2TAP0 167 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 HNRNPA1L2Q32P51 320 aaKnown RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 HS1BP3Q53T59 392 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 ADGRF1Q5T601 910 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3GQ6DHY5 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3CQ6IPX1 549 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
PACS1-214ENST00000533811 KIAA0907Q7Z7F0 614 aaPredicted RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 TBC1D3Q8IZP1 549 aaPredicted RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 STK40Q8N2I9 435 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 CARNMT1Q8N4J0 409 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 LINC00301Q8NCQ3 95 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 KCNE4Q8WWG9 221 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 IPO9Q96P70 1041 aaKnown RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 MAGEF1Q9HAY2 307 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 LRRC4Q9HBW1 653 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 DMAC2Q9NW81 257 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 MORC2Q9Y6X9 1032 aaPredicted RBP9.61□□□□□ -0.87
PACS1-214ENST00000533811 CFAP46Q8IYW2 2715 aa9.61□□□□□ -0.87
PACS1-214ENST00000533811 PVALEFA0A1B0GWK0 134 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 TYW5A2RUC4 315 aaKnown RBP9.6□□□□□ -0.87
PACS1-214ENST00000533811 TTC34A8MYJ7 566 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 IKBKBO14920 756 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 KLK10O43240 276 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 SIGLEC6O43699 453 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 CUTAO60888 179 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 IL1BP01584 269 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 ASLP04424 464 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 KRT13P13646 458 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 ADPRHP54922 357 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 UCNP55089 124 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 E2F1Q01094 437 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 STK4Q13043 487 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 CDH18Q13634 790 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 POM121L1PQ3SYA9 428 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 RAB41Q5JT25 222 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 C1orf220Q5T0J3 134 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 SFMBT2Q5VUG0 894 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 RNF219Q5W0B1 726 aaPredicted RBP9.6□□□□□ -0.87
PACS1-214ENST00000533811 BSPRYQ5W0U4 402 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 NAPEPLDQ6IQ20 393 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 SHC4Q6S5L8 630 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 MMS22LQ6ZRQ5 1243 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 TMC6Q7Z403 805 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 PRPF39Q86UA1 669 aaKnown RBP9.6□□□□□ -0.87
PACS1-214ENST00000533811 SPATS2Q86XZ4 545 aaKnown RBP9.6□□□□□ -0.87
PACS1-214ENST00000533811 SLC9A9Q8IVB4 645 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 CCDC117Q8IWD4 279 aaPredicted RBP9.6□□□□□ -0.87
PACS1-214ENST00000533811 SIX6OS1Q8N1H7 587 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 DCBLD1Q8N8Z6 715 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 SLC4A11Q8NBS3 891 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 KIAA0895Q8NCT3 520 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 TATDN2Q93075 761 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 MYO19Q96H55 970 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 ZNF578Q96N58 590 aaPredicted RBP9.6□□□□□ -0.87
PACS1-214ENST00000533811 FZD4Q9ULV1 537 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 MTMR6Q9Y217 621 aa9.6□□□□□ -0.87
PACS1-214ENST00000533811 ATMQ13315 3056 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 EDDM13A0A1B0GTR0 161 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 YJEFN3A6XGL0 299 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 B8ZZF3 427 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 E7ENQ6 273 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 PIK3R2O00459 728 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 TRIM38O00635 465 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 FFAR2O15552 330 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 MAGEC1O60732 1142 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 PPP6R2O75170 966 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 USP12O75317 370 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 LATS1O95835 1130 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 ADH1BP00325 375 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 C7P10643 843 aa9.59□□□□□ -0.87
PACS1-214ENST00000533811 PDIA4P13667 645 aaKnown RBP9.59□□□□□ -0.87
PACS1-214ENST00000533811 C6P13671 934 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms