RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 GAREM2Q75VX8 874 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 ADAT2Q7Z6V5 191 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 TAC4Q86UU9 113 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 TSC1Q92574 1164 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 MRPS31Q92665 395 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 HAPLN3Q96S86 360 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 PEBP4Q96S96 227 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 RHOXF2Q9BQY4 288 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 TKTL2Q9H0I9 626 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 DDX47Q9H0S4 455 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 PCDH18Q9HCL0 1135 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 ZNF334Q9HCZ1 680 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 MARCH2Q9P0N8 246 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 DNMT3LQ9UJW3 386 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 USP15Q9Y4E8 981 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 V9GYY5 206 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 XIRP2A4UGR9 3374 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ZNF840PA6NDX5 716 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 TLR5O60602 858 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ZDHHC11BP0C7U3 371 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 PFKLP17858 780 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 SERPINB6P35237 376 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ATP5C1P36542 298 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 GCGRP47871 477 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 HCAR3P49019 387 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 NTHL1P78549 312 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 COG7P83436 770 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 RING1Q06587 406 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 BYSLQ13895 437 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 BRD3Q15059 726 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ARHGAP15Q53QZ3 475 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ANKRD20A8PQ5CZ79 823 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 TXNRD3NBQ6F5E7 133 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 WDR93Q6P2C0 686 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 GSTA5Q7RTV2 222 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 SCD5Q86SK9 330 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 UNC45BQ8IWX7 931 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 CCDC185Q8N715 623 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 PRELID2Q8N945 189 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 EIF1ADQ8N9N8 165 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ATL2Q8NHH9 583 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ADAM32Q8TC27 787 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 SUSD6Q92537 303 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 SLCO2A1Q92959 643 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 RNF157Q96PX1 679 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 FAM129AQ9BZQ8 928 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 HBS1LQ9Y450 684 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 RAD54BQ9Y620 910 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 WASF2Q9Y6W5 498 aa11.29□□□□□ -0.6
CCDC90B-218ENST00000533761 CCDC151A5D8V7 595 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 C3orf70A6NLC5 250 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 EEF2KO00418 725 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 FGF10O15520 208 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 MBTPS2O43462 519 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 HEXIM1O94992 359 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 KRT10P13645 584 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TFE3P19532 575 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 DDX6P26196 483 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 L1CAMP32004 1257 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ACTN2P35609 894 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 COILP38432 576 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CCR2P41597 374 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TBX4P57082 545 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TPI1P60174 286 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CUL1Q13616 776 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TRIP4Q15650 581 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 SLC5A9Q2M3M2 681 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 PRSS36Q5K4E3 855 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 AADACL2Q6P093 401 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 LRRC31Q6UY01 552 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CYP4V2Q6ZWL3 525 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TMEM150AQ86TG1 271 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ATP6V0D2Q8N8Y2 350 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CCDC89Q8N998 374 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 LRRN4CLQ8ND94 238 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 FAF2Q96CS3 445 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 DOCK6Q96HP0 2047 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 BTN2A3PQ96KV6 586 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 KRTAP4-8Q9BYQ9 185 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 OSBPL2Q9H1P3 480 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 NMUR1Q9HB89 426 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ARHGEF38Q9NXL2 777 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 GDE1Q9NZC3 331 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 THEGQ9P2T0 379 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 AMACRQ9UHK6 382 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ZFP37Q9Y6Q3 630 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CFAP69A5D8W1 941 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 NCAM2O15394 837 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms